Evidence map›Paper›PMID 37646018›Full record

ArticleiScience2023

Novel human pluripotent stem cell-derived hypothalamus organoids demonstrate cellular diversity.

Lily Sarrafha, Drew R Neavin, Gustavo M Parfitt, Ilya A Kruglikov, Kristen Whitney, Ricardo Reyes, Elena Coccia, Tatyana Kareva, Camille Goldman, Regine Tipon and 5 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Lily SarrafhaNash Family Department of Neuroscience, Mount Sinai, New York, NY 10029, USA.
Drew R NeavinGarvan-Weizmann Centre for Cellular Genomics, Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW 2010, Australia.
Gustavo M ParfittNash Family Department of Neuroscience, Mount Sinai, New York, NY 10029, USA.
Ilya A KruglikovNew York Stem Cell Foundation, New York, NY 10019, USA.
Kristen WhitneyNash Family Department of Neuroscience, Mount Sinai, New York, NY 10029, USA.
Ricardo ReyesNash Family Department of Neuroscience, Mount Sinai, New York, NY 10029, USA.
Elena CocciaNash Family Department of Neuroscience, Mount Sinai, New York, NY 10029, USA.
Tatyana KarevaNash Family Department of Neuroscience, Mount Sinai, New York, NY 10029, USA.
Camille GoldmanNash Family Department of Neuroscience, Mount Sinai, New York, NY 10029, USA.
Regine TiponNew York Stem Cell Foundation, New York, NY 10019, USA.
Gist CroftNew York Stem Cell Foundation, New York, NY 10019, USA.
John F CraryNash Family Department of Neuroscience, Mount Sinai, New York, NY 10029, USA.
Joseph E PowellGarvan-Weizmann Centre for Cellular Genomics, Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW 2010, Australia.
Joel BlanchardNash Family Department of Neuroscience, Mount Sinai, New York, NY 10029, USA.
Tim AhfeldtNash Family Department of Neuroscience, Mount Sinai, New York, NY 10029, USA.
Allen Institute for Brain Science · USNew York Stem Cell Foundation · USGarvan Institute of Medical Research · AU

Funding

Research Training in the Neuroscience of AgingT32AG049688 · NIA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Joseph Michael Castellano, PATRICK R HOF · 2015 to 2026
$3.0M
Understanding Cell-type Vulnerability and Oxidative Stress Pathology in Parkinson's Disease Using Isogenic Human Dopaminergic NeuronsR01NS114239 · NINDS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BLANCHARD, JOEL WILLIAM · 2020 to 2024
$2.2M
NIA NIH HHS T32 AG049688NINDS NIH HHS R01 NS114239
6 · The paper itself

Abstract

The hypothalamus is a region of the brain that plays an important role in regulating body functions and behaviors. There is a growing interest in human pluripotent stem cells (hPSCs) for modeling diseases that affect the hypothalamus. Here, we established an hPSC-derived hypothalamus organoid differentiation protocol to model the cellular diversity of this brain region. Using an hPSC line with a tyrosine hydroxylase (TH)-TdTomato reporter for dopaminergic neurons (DNs) and other TH-expressing cells, we interrogated DN-specific pathways and functions in electrophysiologically active hypothalamus organoids. Single-cell RNA sequencing (scRNA-seq) revealed diverse neuronal and non-neuronal cell types in mature hypothalamus organoids. We identified several molecularly distinct hypothalamic DN subtypes that demonstrated different developmental maturities. Our

Indexed as

Cell biologyNeuroscienceStem cells researchTranscriptomics

Identifiers

PMID37646018
PMCPMC10460991
OpenAlexW4385478375

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.