Evidence map›Paper›PMID 37647077›Full record

ArticleAging2023

Identification of an endoplasmic reticulum stress-related prognostic risk model with excellent prognostic and clinical value in oral squamous cell carcinoma.

Mingyang Cheng, Xin Fan, Mu He, Xianglin Dai, Xiaoli Liu, Jinming Hong, Laiyu Zhang, Lan Liao

Open access · hybridAbstract read
In one paragraph

Article in Aging, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Mingyang ChengThe Affiliated Stomatological Hospital of Nanchang University, Nanchang, Jiangxi, China.
Xin FanThe Affiliated Stomatological Hospital of Nanchang University, Nanchang, Jiangxi, China.
Mu HeThe Stomatology College of Nanchang University, Nanchang, Jiangxi, China.
Xianglin DaiThe Affiliated Stomatological Hospital of Nanchang University, Nanchang, Jiangxi, China.
Xiaoli LiuThe Affiliated Stomatological Hospital of Nanchang University, Nanchang, Jiangxi, China.
Jinming HongThe Affiliated Stomatological Hospital of Nanchang University, Nanchang, Jiangxi, China.
Laiyu ZhangThe Affiliated Stomatological Hospital of Nanchang University, Nanchang, Jiangxi, China.
Lan LiaoThe Affiliated Stomatological Hospital of Nanchang University, Nanchang, Jiangxi, China.
Nanchang University · CNJinggangshan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRecently, endoplasmic reticulum stress related gene (ERS) markers have performed very well in predicting the prognosis of tumor patients.

methodsThe differentially expressed genes in Oral squamous cell carcinoma (OSCC) were obtained from TCGA and GTEx database. Three prognosis-related and differentially expressed ERSs were screened out by Least Absolute Selection and Shrinkage Operator (Lasso) regression to construct a prognostic risk model. Receiver Operating Characteristic Curve (ROC), riskplots and survival curves were used to verify the model's accuracy in predicting prognosis. Multi-omics analysis of immune infiltration, gene mutation, and stem cell characteristics were performed to explore the possible mechanism of OSCC. Finally, we discussed the model's clinical application value from the perspective of drug sensitivity.

resultsThree genes used in the model (IBSP, RDM1, RBP4) were identified as prognostic risk factors. Bioinformatics analysis, tissue and cell experiments have fully verified the abnormal expression of these three genes in OSCC. Multiple validation methods and internal and external datasets confirmed the model's excellent performance in predicting and discriminating prognosis. Cox regression analysis identified risk score as an independent predictor of prognosis. Multi-omics analysis found strong correlations between risk scores and immune cells, cell stemness index, and tumor mutational burden (TMB). It was also observed that the risk score was closely related to the half maximal inhibitory concentration of docetaxel, gefitinib and erlotinib. The excellent performance of the nomogram has been verified by various means.

conclusionA prognostic model with high clinical application value was constructed. Immune cells, cellular stemness, and TMB may be involved in the progression of OSCC.

Indexed as

Carcinoma, Squamous CellHead and Neck NeoplasmsMouth NeoplasmsDNA-Binding ProteinsEndoplasmic Reticulum StressHumansPrognosisRetinol-Binding Proteins, PlasmaSquamous Cell Carcinoma of Head and NeckDNA-Binding ProteinsRBP4 protein, humanRDM1 protein, humanRetinol-Binding Proteins, Plasmaendoplasmic reticulum stressIdentificationoral squamous cell carcinomaprognostic and clinical valueprognostic risk model

Identifiers

PMID37647077
PMCPMC10599730
OpenAlexW4386169144

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.