Evidence map›Paper›PMID 37653336›Full record

ArticleNature plants2023

Regulation of gene editing using T-DNA concatenation.

Lauren Dickinson, Wenxin Yuan, Chantal LeBlanc, Geoffrey Thomson, Siyuan Wang, Yannick Jacob

Abstract read
In one paragraph

Article in Nature plants, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Transposase-Assisted Donor Tethering Boosts Large-Fragment HDR in Plants.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Beyond a few bases: methods for large DNA insertion and gene targeting in plants.The Plant journal : for cell and molecular biology · 2025
    Review
  6. Article
  7. Article
  8. The brassinosteroid receptor geneScience advances · 2024
    Article
  9. Article
  10. Genomic consequences associated with Agrobacterium-mediated transformation of plants.The Plant journal : for cell and molecular biology · 2024
    Review
  11. The power of repetition.Nature plants · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Lauren Dickinson *Department of Molecular, Cellular and Developmental Biology, Faculty of Arts and Sciences, Yale University, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-7358-0806
Wenxin Yuan *Department of Molecular, Cellular and Developmental Biology, Faculty of Arts and Sciences, Yale University, New Haven, CT, USA.
Chantal LeBlancDepartment of Molecular, Cellular and Developmental Biology, Faculty of Arts and Sciences, Yale University, New Haven, CT, USA.ORCID http://orcid.org/0000-0003-1173-3579
Geoffrey ThomsonDepartment of Molecular, Cellular and Developmental Biology, Faculty of Arts and Sciences, Yale University, New Haven, CT, USA.ORCID http://orcid.org/0000-0003-0848-1550
Siyuan WangDepartment of Genetics, Yale School of Medicine, Yale University, New Haven, CT, USA.ORCID http://orcid.org/0000-0001-6550-4064
Yannick JacobDepartment of Molecular, Cellular and Developmental Biology, Faculty of Arts and Sciences, Yale University, New Haven, CT, USA. yannick.jacob@yale.edu.ORCID http://orcid.org/0000-0003-4741-0755

Funding

Understanding the roles of histone H3 variants in promoting genomic and epigenomic stability during DNA replication and agingR35GM128661 · NIGMS · YALE UNIVERSITY · PI YANNICK JACOB · 2018 to 2026
$4.0M
Building the 3D genomic regulatomeDP2GM137414 · NIGMS · YALE UNIVERSITY · PI WANG, SIYUAN · 2019 to 2019
$2.5M
High Performance Computing Instrumentation for the Yale Center for Genome AnalysisS10OD030363 · OD · YALE UNIVERSITY · PI MANE, SHRIKANT M · 2022 to 2022
$1.2M
NIGMS NIH HHS DP2 GM137414NIGMS NIH HHS R35 GM128661NIH HHS S10 OD030363
6 · The paper itself

Abstract

Transformation via Agrobacterium tumefaciens is the predominant method used to introduce exogenous DNA into plant genomes

Indexed as

ArabidopsisGene EditingDNA, BacterialGenes, PlantGenome, PlantRetroelementsDNA, BacterialRetroelementsT-DNA

Identifiers

PMID37653336
PMCPMC11193869

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.