Evidence map›Paper›PMID 37654510›Full record

ArticleRSC chemical biology2023

The 2'-hydroxy group of flavin mononucleotide influences the catalytic function and promiscuity of the flavoprotein iodotyrosine dehalogenase.

Anton Kozyryev, Petrina A Boucher, Carla M Quiñones-Jurgensen, Steven E Rokita

Open access · goldAbstract read
In one paragraph

Article in RSC chemical biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Anton KozyryevDepartment of Chemistry, Johns Hopkins University 3400 N. Charles St. Maryland 21218 USA rokita@jhu.edu +1-410-516-5793.ORCID https://orcid.org/0009-0008-2831-0373
Petrina A BoucherDepartment of Chemistry, Johns Hopkins University 3400 N. Charles St. Maryland 21218 USA rokita@jhu.edu +1-410-516-5793.
Carla M Quiñones-JurgensenDepartment of Chemistry, Johns Hopkins University 3400 N. Charles St. Maryland 21218 USA rokita@jhu.edu +1-410-516-5793.
Steven E RokitaDepartment of Chemistry, Johns Hopkins University 3400 N. Charles St. Maryland 21218 USA rokita@jhu.edu +1-410-516-5793.ORCID https://orcid.org/0000-0002-2292-2917
Johns Hopkins University · US

Funding

Switching Between One and Two Electron Mechanisms in the Nitroreductase SuperfamilyR01GM130937 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI ROKITA, STEVEN E · 2019 to 2022
$1.3M
NIGMS NIH HHS R01 GM130937
6 · The paper itself

Abstract

The isoalloxazine ring system of the flavin cofactor is responsible for much of the catalytic power and diversity associated with flavoproteins. While the specificity of these enzymes is greatly influenced by the surrounding protein environment, the ribityl group of the cofactor may also participate in stabilizing transient intermediates formed by substrates and flavin. A conserved interaction between the phenolate oxygen of l-iodotyrosine and the 2'-hydroxy group of flavin mononucleotide (FMN) bound to iodotyrosine deiodianase (IYD) implied such a contribution to catalysis. Reconstitution of this deiodinase with 2'-deoxyflavin mononucleotide (2'-deoxyFMN) decreased the overall catalytic efficiency of l-iodotyrosine dehalogenation (

Identifiers

PMID37654510
PMCPMC10467613
OpenAlexW4385565905

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.