Evidence map›Paper›PMID 37695739›Full record

SynthesisAging2023

Herpesvirus latent infection promotes stroke via activating the OTUD1/NF-κB signaling pathway.

Jiacai Lin, Yangrui Zheng, Ning Zhao, Fang Cui, Siting Wu

Open access · hybridAbstract readMeta-Analysis
In one paragraph

Synthesis in Aging, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jiacai LinDepartment of Neurology, Hainan Hospital of Chinese PLA General Hospital, Sanya 572013, China.
Yangrui ZhengDepartment of Neurosurgery, Hainan Hospital of Chinese PLA General Hospital, Sanya 572013, China.
Ning ZhaoDepartment of Neurology, Hainan Hospital of Chinese PLA General Hospital, Sanya 572013, China.
Fang CuiDepartment of Neurology, Hainan Hospital of Chinese PLA General Hospital, Sanya 572013, China.
Siting WuDepartment of Neurology, Hainan Hospital of Chinese PLA General Hospital, Sanya 572013, China.
Chinese PLA General Hospital · CNHainan General Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveOur study aimed to reveal the molecular mechanisms underlying the regulation of cerebral infarction by herpes virus latency infection via the OTUD1/NF-κB signaling pathway using evidence-based medicine Meta-analysis and bioinformatics analysis.

methodsWe conducted a Meta-analysis by searching Pubmed, Embase, and Web of Science databases to evaluate the correlation between herpes virus infection and increased risk of cerebral infarction. We obtained wild-type or mutant herpes virus latent infection-related brain tissue datasets from the GEO database and performed differential analysis to identify differentially expressed genes (DEGs) in the brain tissue after herpes virus latent infection. We further conducted WGCNA co-expression analysis on the cerebral infarction-related datasets from the GEO database to obtain key module genes and intersect them with the DEGs. We used ROC curve analysis to identify the key gene OTUD1 for predicting the occurrence of cerebral infarction and combined correlation and pathway enrichment analyses to identify the downstream pathways regulated by OTUD1.

resultsOur meta-analysis revealed that herpes virus infection is associated with an increased risk of cerebral infarction. By integrating the differential analysis and WGCNA co-expression analysis of GEO chip data, we identified three key genes mediating cerebral infarction after herpes virus latent infection. ROC curve analysis identified the key gene OTUD1, and the correlation and pathway enrichment analyses showed that OTUD1 regulates the NF-κB signaling pathway to mediate cerebral infarction.

conclusionHerpes virus latent infection promotes cerebral infarction by activating the OTUD1/NF-κB signaling pathway.

Indexed as

Latent InfectionStrokeVirus DiseasesCerebral InfarctionHumansNF-kappa BSignal TransductionUbiquitin-Specific ProteasesNF-kappa BOTUD1 protein, humanUbiquitin-Specific Proteasesbioinformaticscerebral infarctionevidence-based medicine meta-analysisherpes viruslatent infectionOTUD1/NF-κB signaling pathway

Identifiers

PMID37695739
PMCPMC10522389
OpenAlexW4386574872

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.