Evidence map›Paper›PMID 37726026›Full record

ArticleGene2024

Histone acetylation and deacetylation - Mechanistic insights from structural biology.

Avinash B Patel, Yuan He, Ishwar Radhakrishnan

Open access · greenAbstract read
In one paragraph

Article in Gene, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Avinash B PatelDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208, USA. Electronic address: avinash.patel@northwestern.edu.
Yuan HeDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208, USA. Electronic address: yuanhe@northwestern.edu.
Ishwar RadhakrishnanDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208, USA. Electronic address: i-radhakrishnan@northwestern.edu.
Northwestern University · US

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
Structure and Mechanism of Non-Homologous End JoiningR01GM135651 · NIGMS · NORTHWESTERN UNIVERSITY · PI HE, YUAN · 2020 to 2024
$1.8M
Structure and Mechanism of Eukaryotic Transcription RegulationR01GM144559 · NIGMS · NORTHWESTERN UNIVERSITY · PI HE, YUAN · 2022 to 2025
$1.4M
NCI NIH HHS P01 CA092584NIGMS NIH HHS R01 GM135651NIGMS NIH HHS R01 GM144559
6 · The paper itself

Abstract

Histones are subject to a diverse array of post-translational modifications. Among them, lysine acetylation is not only the most pervasive and dynamic modification but also highly consequential for regulating gene transcription. Although enzymes responsible for the addition and removal of acetyl groups were discovered almost 30 years ago, high-resolution structures of the enzymes in the context of their native complexes are only now beginning to become available, thanks to revolutionary technologies in protein structure determination and prediction. Here, we will review our current understanding of the molecular mechanisms of acetylation and deacetylation engendered by chromatin-modifying complexes, compare and contrast shared features, and discuss some of the pressing questions for future studies.

Indexed as

HistonesProtein Processing, Post-TranslationalAcetylationBiologyHistonesChromatin-modifying enzymeCryo-EMGene activationHATHDACHistone acetylationHistone deacetylationHistone modificationStructural biologyTranscription activationTranscription regulationTranscription repression

Identifiers

PMID37726026
PMCPMC11253779
OpenAlexW4386811558

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.