Evidence map›Paper›PMID 37728563›Full record

ArticleThe Journal of experimental medicine2023

Identifying biomarkers of heterogeneity and transplantation efficacy in retinal pigment epithelial cells.

Farhad Farjood, Justine D Manos, Yue Wang, Anne L Williams, Cuiping Zhao, Susan Borden, Nazia Alam, Glen Prusky, Sally Temple, Jeffrey H Stern and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 21 citations in OpenAlex.

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  17. Animal models for the evaluation of retinal stem cell therapies.Progress in retinal and eye research · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Farhad FarjoodNeural Stem Cell Institute , Rensselaer, NY, USA.ORCID 0000-0002-8826-6721
Justine D ManosAbbvie, Cambridge Research Center, Cambridge, MA, USA.ORCID 0000-0002-4265-4016
Yue WangNeural Stem Cell Institute , Rensselaer, NY, USA.ORCID 0009-0007-6647-3379
Anne L WilliamsNeural Stem Cell Institute , Rensselaer, NY, USA.ORCID 0000-0002-2491-5294
Cuiping ZhaoRegeneron, Rensselaer, NY, USA.ORCID 0009-0003-3885-7093
Susan BordenNeural Stem Cell Institute , Rensselaer, NY, USA.ORCID 0009-0001-2361-1686
Nazia AlamBurke Neurological Institute at Weill Cornell Medicine , White Plains, NY, USA.ORCID 0000-0002-1941-2190
Glen PruskyBurke Neurological Institute at Weill Cornell Medicine , White Plains, NY, USA.ORCID 0000-0001-9658-8598
Sally TempleNeural Stem Cell Institute , Rensselaer, NY, USA.ORCID 0000-0001-7301-783X
Jeffrey H SternNeural Stem Cell Institute , Rensselaer, NY, USA.ORCID 0000-0002-5272-5025
Nathan C BolesNeural Stem Cell Institute , Rensselaer, NY, USA.ORCID 0000-0002-9253-9411
Neural Stem Cell Institute · USCornell University · USAbbVie (United States) · USRegeneron (United States) · US

Funding

Characterizing Human RPE Cell Proliferation to Advance Endogenous RegenerationR01EY032138 · NEI · REGENERATIVE RESEARCH FOUNDATION · PI TEMPLE, SALLY · 2021 to 2024
$2.3M
Defining the molecular mechanisms underlying human RPE plasticityR01EY022079 · NEI · REGENERATIVE RESEARCH FOUNDATION · PI TEMPLE, SALLY · 2012 to 2016
$2.2M
Transplantation of Adult, Tissue-Specific RPE Stem Cells as Therapy for Non-exudative Age-Related Macular Degeneration AMDU01EY030581 · NEI · REGENERATIVE RESEARCH FOUNDATION · PI Jeffrey H Stern · 2019 to 2026
$1.7M
Characterization of human RPE subpopulations at the single cell levelR01EY029281 · NEI · REGENERATIVE RESEARCH FOUNDATION · PI STERN, JEFFREY H · 2018 to 2021
$1.7M
NEI NIH HHS R01 EY022079NEI NIH HHS R01 EY029281NEI NIH HHS R01 EY032138NEI NIH HHS U01 EY030581NIH HHS R01EY032138
6 · The paper itself

Abstract

Transplantation of retinal pigment epithelial (RPE) cells holds great promise for patients with retinal degenerative diseases, such as age-related macular degeneration. In-depth characterization of RPE cell product identity and critical quality attributes are needed to enhance efficacy and safety of replacement therapy strategies. Here, we characterized an adult RPE stem cell-derived (RPESC-RPE) cell product using bulk and single-cell RNA sequencing (scRNA-seq), assessing functional cell integration in vitro into a mature RPE monolayer and in vivo efficacy by vision rescue in the Royal College of Surgeons rats. scRNA-seq revealed several distinct subpopulations in the RPESC-RPE product, some with progenitor markers. We identified RPE clusters expressing genes associated with in vivo efficacy and increased cell integration capability. Gene expression analysis revealed lncRNA (TREX) as a predictive marker of in vivo efficacy. TREX knockdown decreased cell integration while overexpression increased integration in vitro and improved vision rescue in the RCS rats.

Indexed as

Gene Expression ProfilingNeuronsAnimalsBiomarkersEpithelial CellsRatsRetinal PigmentsBiomarkersRetinal Pigments

Identifiers

PMID37728563
PMCPMC10510736
OpenAlexW4386878722

What Socratic holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.