Evidence map›Paper›PMID 37744032›Full record

ArticleiScience2023

Antagonism among DUX family members evolved from an ancestral toxic single homeodomain protein.

Darko Bosnakovski, Erik A Toso, Elizabeth T Ener, Micah D Gearhart, Lulu Yin, Felipe F Lüttmann, Alessandro Magli, Ke Shi, Johnny Kim, Hideki Aihara and 1 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  3. Exit from totipotency in mammals: an epigenetic perspective.Frontiers in cell and developmental biology · 2026
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Darko BosnakovskiLillehei Heart Institute, University of Minnesota, Minneapolis, MN 55455, USA.
Erik A TosoLillehei Heart Institute, University of Minnesota, Minneapolis, MN 55455, USA.
Elizabeth T EnerLillehei Heart Institute, University of Minnesota, Minneapolis, MN 55455, USA.
Micah D GearhartDepartment of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN 55455, USA.
Lulu YinDepartment of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, MN 55455, USA.
Felipe F LüttmannMax Planck Institute for Heart and Lung Research, Bad Nauheim, Germany.
Alessandro MagliDepartment of Cardiology, University of Minnesota, Minneapolis, MN 55455, USA.
Ke ShiDepartment of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, MN 55455, USA.
Johnny KimMax Planck Institute for Heart and Lung Research, Bad Nauheim, Germany.
Hideki AiharaDepartment of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, MN 55455, USA.
Michael KybaLillehei Heart Institute, University of Minnesota, Minneapolis, MN 55455, USA.
University of Minnesota · USJohannes Gutenberg University Mainz · DEMax Planck Institute for Heart and Lung Research · DE

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI STEVEN E EALICK · 2018 to 2026
$34.2M
Probing the Activity of DUX4 in FSHDR01AR055685 · NIAMS · UNIVERSITY OF MINNESOTA · PI Michael Kyba · 2010 to 2026
$7.0M
Structural studies of viral replication and invasionR35GM118047 · NIGMS · UNIVERSITY OF MINNESOTA · PI Hideki Aihara · 2016 to 2026
$6.3M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
To explore the molecular and cellular effects of transient DUX4 expression in skeletal muscleR01AR081228 · NIAMS · UNIVERSITY OF MINNESOTA · PI Darko Bosnakovski · 2022 to 2026
$1.6M
NCRR NIH HHS S10 RR029205NIAMS NIH HHS R01 AR055685NIAMS NIH HHS R01 AR081228NIGMS NIH HHS P30 GM124165NIGMS NIH HHS R35 GM118047
6 · The paper itself

Abstract

Double homeobox (DUX) genes are unique to eutherian mammals, expressed transiently during zygotic genome activation (ZGA) and involved in facioscapulohumeral muscular dystrophy (FSHD) and cancer when misexpressed. We evaluate the 3 human DUX genes and the ancestral single homeobox gene sDUX from the non-eutherian mammal, platypus, and find that DUX4 cytotoxicity is not shared with DUXA or DUXB, but surprisingly is shared with platypus sDUX, which binds DNA as a homodimer and activates numerous ZGA genes and long terminal repeat (LTR) elements. DUXA, although transcriptionally inactive, has DNA binding overlap with DUX4, and DUXA-VP64 activates DUX4 targets and is cytotoxic. DUXA competition antagonizes the activity of DUX4 on its target genes, including in FSHD patient cells. Since DUXA is a DUX4 target gene, this competition potentiates feedback inhibition, constraining the window of DUX4 activity. The DUX gene family therefore comprises antagonistic members of opposing function, with implications for their roles in ZGA, FSHD, and cancer.

Indexed as

Developmental geneticsEvolutionary developmental biologyMolecular interactionMolecular toxicology

Identifiers

PMID37744032
PMCPMC10514451
OpenAlexW4386391354

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.