Evidence map›Paper›PMID 37747935›Full record

ArticlePLoS pathogens2023

Functional and structural analyses reveal that a dual domain sialidase protects bacteria from complement killing through desialylation of complement factors.

Nicholas D Clark, Christopher Pham, Kurni Kurniyati, Ching Wooen Sze, Laurynn Coleman, Qin Fu, Sheng Zhang, Michael G Malkowski, Chunhao Li

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Nicholas D ClarkDepartment of Structural Biology, Jacobs School of Medicine and Biomedical Sciences, University of Buffalo, the State University of New York, Buffalo, New York, United States of America.
Christopher PhamPhilips Institute for Oral Health Research, Virginia Commonwealth University, Richmond, Virginia, United States of America.
Kurni KurniyatiPhilips Institute for Oral Health Research, Virginia Commonwealth University, Richmond, Virginia, United States of America.
Ching Wooen SzePhilips Institute for Oral Health Research, Virginia Commonwealth University, Richmond, Virginia, United States of America.
Laurynn ColemanPhilips Institute for Oral Health Research, Virginia Commonwealth University, Richmond, Virginia, United States of America.
Qin FuProteomics Facility, Institute of Biotechnology, Cornell University, Ithaca, New York, United States of America.
Sheng ZhangProteomics Facility, Institute of Biotechnology, Cornell University, Ithaca, New York, United States of America.
Michael G MalkowskiDepartment of Structural Biology, Jacobs School of Medicine and Biomedical Sciences, University of Buffalo, the State University of New York, Buffalo, New York, United States of America.
Chunhao LiPhilips Institute for Oral Health Research, Virginia Commonwealth University, Richmond, Virginia, United States of America.ORCID 0000-0002-1872-4870
Virginia Commonwealth University · USCornell University · USUniversity at Buffalo, State University of New York · US

Funding

Exploring New Virulence Factors of the Oral Spirochete Treponema denticolaR01DE023080 · NIDCR · VIRGINIA COMMONWEALTH UNIVERSITY · PI Chunhao Chris Li · 2013 to 2026
$5.2M
Enabling Access to Cutting-Edge Biomedical and Behavioral ScienceR25GM095459 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI DUBOCOVICH, MARGARITA L · 2012 to 2021
$4.4M
Dissecting the role of sialic acid and sialidase in the pathophysiology of Porphyromonas gingivalisR01DE030667 · NIDCR · VIRGINIA COMMONWEALTH UNIVERSITY · PI LI, CHUNHAO CHRIS · 2021 to 2025
$2.4M
Acquisition of a Hybrid Quadrupole Time of Flight LC-MS/MS System for the CornellS10OD017992 · OD · CORNELL UNIVERSITY · PI ZHANG, SHENG · 2014 to 2014
$600k
Elucidating the role of sialic acids and sialidase in the pathogenesis of Porphyromonas ginigvalisF31DE029999 · NIDCR · VIRGINIA COMMONWEALTH UNIVERSITY · PI PHAM, CHRISTOPHER KHOA · 2020 to 2022
$125k
NIDCR NIH HHS F31 DE029999NIDCR NIH HHS R01 DE023080NIDCR NIH HHS R01 DE030667NIGMS NIH HHS R25 GM095459NIH HHS S10 OD017992
6 · The paper itself

Abstract

The complement system is the first line of innate immune defense against microbial infections. To survive in humans and cause infections, bacterial pathogens have developed sophisticated mechanisms to subvert the complement-mediated bactericidal activity. There are reports that sialidases, also known as neuraminidases, are implicated in bacterial complement resistance; however, its underlying molecular mechanism remains elusive. Several complement proteins (e.g., C1q, C4, and C5) and regulators (e.g., factor H and C4bp) are modified by various sialoglycans (glycans with terminal sialic acids), which are essential for their functions. This report provides both functional and structural evidence that bacterial sialidases can disarm the complement system via desialylating key complement proteins and regulators. The oral bacterium Porphyromonas gingivalis, a "keystone" pathogen of periodontitis, produces a dual domain sialidase (PG0352). Biochemical analyses reveal that PG0352 can desialylate human serum and complement factors and thus protect bacteria from serum killing. Structural analyses show that PG0352 contains a N-terminal carbohydrate-binding module (CBM) and a C-terminal sialidase domain that exhibits a canonical six-bladed β-propeller sialidase fold with each blade composed of 3-4 antiparallel β-strands. Follow-up functional studies show that PG0352 forms monomers and is active in a broad range of pH. While PG0352 can remove both N-acetylneuraminic acid (Neu5Ac) and N-glycolyl-neuraminic acid (Neu5Gc), it has a higher affinity to Neu5Ac, the most abundant sialic acid in humans. Structural and functional analyses further demonstrate that the CBM binds to carbohydrates and serum glycoproteins. The results shown in this report provide new insights into understanding the role of sialidases in bacterial virulence and open a new avenue to investigate the molecular mechanisms of bacterial complement resistance.

Indexed as

NeuraminidaseSialic AcidsComplement System ProteinsHumansImmunologic FactorsN-Acetylneuraminic AcidPorphyromonas gingivalisComplement System ProteinsImmunologic FactorsN-Acetylneuraminic AcidNeuraminidaseSialic Acids

Identifiers

PMID37747935
PMCPMC10553830
OpenAlexW4387011801

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.