Evidence map›Paper›PMID 37773290›Full record

ArticleGraefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie2024

Is tear proteome profile a predictor of developing uveitis in ANA-positive patients with oligoarticular juvenile idiopathic arthritis?

Büşra Yılmaz Tuğan, Mehmet Sarıhan, Murat Kasap, Gürler Akpınar, Levent Karabaş, Nihal Şahin, Nurşen Yüksel, Yunus Emre Bayrak, Hafize Emine Sönmez

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In one paragraph

Article in Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Büşra Yılmaz TuğanDepartment of Ophthalmology, Kocaeli University Faculty of Medicine, Kocaeli, Turkey. busrayilmaz87@hotmail.com.ORCID http://orcid.org/0000-0001-6660-1608
Mehmet SarıhanDepartment of Basic Medical Sciences, Medical Biology, Kocaeli University Faculty of Medicine, Kocaeli, Turkey.ORCID http://orcid.org/0000-0002-1565-5718
Murat KasapDepartment of Basic Medical Sciences, Medical Biology, Kocaeli University Faculty of Medicine, Kocaeli, Turkey.ORCID http://orcid.org/0000-0001-8527-2096
Gürler AkpınarDepartment of Basic Medical Sciences, Medical Biology, Kocaeli University Faculty of Medicine, Kocaeli, Turkey.ORCID http://orcid.org/0000-0002-9675-3714
Levent KarabaşDepartment of Ophthalmology, Kocaeli University Faculty of Medicine, Kocaeli, Turkey.ORCID http://orcid.org/0000-0003-4271-4741
Nihal ŞahinDepartment of Pediatrics, Division of Pediatric Rheumatology, Kocaeli University Faculty of Medicine, Kocaeli, Turkey.ORCID http://orcid.org/0000-0002-2122-6952
Nurşen YükselDepartment of Ophthalmology, Kocaeli University Faculty of Medicine, Kocaeli, Turkey.ORCID http://orcid.org/0000-0002-9555-6508
Yunus Emre BayrakDepartment of Pediatrics, Division of Pediatric Rheumatology, Kocaeli University Faculty of Medicine, Kocaeli, Turkey.ORCID http://orcid.org/0000-0001-8709-6962
Hafize Emine SönmezDepartment of Pediatrics, Division of Pediatric Rheumatology, Kocaeli University Faculty of Medicine, Kocaeli, Turkey.ORCID http://orcid.org/0000-0002-9186-3068
Kocaeli Üniversitesi · TR

Funding

Kocaeli Üniversitesi Kocaeli University BAP Unit (Project number: TSA-2022-2999)
6 · The paper itself

Abstract

purposeAlthough less than one-third of anti-nuclear antibody (ANA) positive patients with oJIA develop uveitis, ANA positivity is still the most well-known marker for assessing the risk of uveitis in oligoarticular JIA (oJIA). Therefore, novel biomarkers are needed to better assess the risk of developing uveitis. For this purpose, we performed a comparative tear proteome analysis of uveitis patients to reveal the identity of differentially regulated proteins.

designTear samples were collected using the Schirmer strips in 7 oJIA and 7 oJIA patients with uveitis (oJIA-U). All oJIA-U patients had developed bilateral anterior uveitis and were inactive and topical treatment-free.

methodsThe nHPLC LC-MS/MS system was used for protein identification and label-free proteome comparisons. The PANTHER and STRING analyses were carried out using UniProt accession numbers of the identified proteins.

resultsPatient characteristics, e.g., age, gender, disease duration, and treatments were similar. For protein identification, three different databases were searched. Twenty-two, 147, and 258 database searches, respectively. Of these, 15 were common to all three proteome databases. Of these 15 proteins, 10 proteins were upregulated, and 2 were downregulated, based on the twofold regulation criteria. The upregulated proteins were, namely, cystatin-S, secretoglobin family 1D member, opiorphin prepropeptide, mammaglobin-B, lysozyme C, mesothelin, immunoglobulin kappa constant, extracellular glycoprotein lacritin, beta-2-microglobulin, and immunoglobulin J chain. The downregulated proteins were dermcidin and prolactin-inducible protein. Among the differentially regulated proteins, cystatin-S was the most regulated protein with an 18-fold upregulation ratio in tear samples from uveitis patients.

conclusionHere, the identities and regulation ratios of several proteins were revealed when tear samples from uveitis patients were compared to patients without uveitis. These proteins are putative biomarkers for assessing uveitis risk and require further attention.

Indexed as

Arthritis, JuvenileCystatinsUveitisBiomarkersChromatography, LiquidHumansProteomeTandem Mass SpectrometryBiomarkersCystatinsProteomeOligoarticular juvenile idiopathic arthritisProteomeTearUveitis

Identifiers

PMID37773290
OpenAlexW4387169883

What Socratic holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.