Evidence map›Paper›PMID 37796037›Full record

ArticleDevelopment (Cambridge, England)2023

Mapping oto-pharyngeal development in a human inner ear organoid model.

Matthew R Steinhart, Wouter H van der Valk, Daniel Osorio, Sara A Serdy, Jingyuan Zhang, Carl Nist-Lund, Jin Kim, Cynthia Moncada-Reid, Liang Sun, Jiyoon Lee and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Development (Cambridge, England), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Inner Ear Organoids: Recent Progress and Challenges.Stem cell reviews and reports · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. AAV-mediated exon skipping therapy for Usher syndrome, type 2A.Molecular therapy : the journal of the American Society of Gene Therapy · 2026
    Article
  7. Review
  8. The Reconstruction of Peripheral Auditory Circuit: Recent Advances and Future Challenges.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  9. Article
  10. Review
  11. Review
  12. Inner Ear Organoids: Strengths and Limitations.Journal of the Association for Research in Otolaryngology : JARO · 2024
    Article
  13. Article
  14. Cartilage organoids and osteoarthritis research: a narrative review.Frontiers in bioengineering and biotechnology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Matthew R SteinhartDepartment of Otolaryngology, Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0002-9619-6057
Wouter H van der ValkDepartment of Otolaryngology, Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0001-5661-7796
Daniel OsorioResearch Computing, Department of Information Technology; Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0003-4424-8422
Sara A SerdyDepartment of Otolaryngology, Boston Children's Hospital, Boston, MA 02115, USA.
Jingyuan ZhangDepartment of Otolaryngology, Boston Children's Hospital, Boston, MA 02115, USA.
Carl Nist-LundDepartment of Otolaryngology, Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0002-0224-7387
Jin KimDepartment of Otolaryngology, Boston Children's Hospital, Boston, MA 02115, USA.
Cynthia Moncada-ReidSpeech and Hearing Bioscience and Technology (SHBT) Graduate Program, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0003-3571-6183
Liang SunResearch Computing, Department of Information Technology; Boston Children's Hospital, Boston, MA 02115, USA.
Jiyoon LeeDepartment of Otolaryngology, Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0002-5561-5331
Karl R KoehlerDepartment of Otolaryngology, Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0002-0685-538X
Boston Children's Hospital · USHarvard University · US

Funding

Indiana Clinical and Translational Sciences InstituteUL1TR001108 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI DENNE, SCOTT C., SHEKHAR, ANANTHA · 2013 to 2017
$23.3M
Indiana Medical Scientist/Engineer Training ProgramT32GM077229 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI GASTON, BENJAMIN, HERBERT, BRITTNEY-SHEA · 2008 to 2022
$6.0M
Engineering multi-lineage inner ear organoidsR01DC017461 · NIDCD · INDIANA UNIVERSITY INDIANAPOLIS · PI Karl Russell Koehler · 2019 to 2026
$4.7M
Indiana Medical Scientist/Engineer Training ProgramT32GM148382 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI Benjamin Gaston, Emily K Sims · 2023 to 2026
$3.9M
EXTRAMURAL RESEARCH FACILITIES IMPROVEMENT: NEUROLOGICAL DISORDERS:ALZ, PDC06RR020128 · NCRR · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI FIFE, ROSE S · 2004 to 2004
$3.7M
Generation of human skin organoids from pluripotency (Admin Supplement)R01AR075018 · NIAMS · BOSTON CHILDREN'S HOSPITAL · PI Karl Russell Koehler · 2019 to 2026
$3.6M
Modeling Otic Neurogenesis in Human Stem Cell-Derived OrganoidsR03DC015624 · NIDCD · INDIANA UNIVERSITY INDIANAPOLIS · PI KOEHLER, KARL RUSSELL · 2016 to 2018
$471k
Modeling Neurofibromatosis Type 2 with Inner Ear OrganoidsF30DC018715 · NIDCD · INDIANA UNIVERSITY INDIANAPOLIS · PI STEINHART, MATTHEW REED · 2020 to 2024
$241k
NCATS NIH HHS UL1 TR001108NCRR NIH HHS C06 RR020128NIAMS NIH HHS R01 AR075018NIDCD NIH HHS F30 DC018715NIDCD NIH HHS R01 DC017461NIDCD NIH HHS R03 DC015624NIGMS NIH HHS T32 GM077229NIGMS NIH HHS T32 GM148382NIH HHS R01AR075018
6 · The paper itself

Abstract

Inner ear development requires the coordination of cell types from distinct epithelial, mesenchymal and neuronal lineages. Although we have learned much from animal models, many details about human inner ear development remain elusive. We recently developed an in vitro model of human inner ear organogenesis using pluripotent stem cells in a 3D culture, fostering the growth of a sensorineural circuit, including hair cells and neurons. Despite previously characterizing some cell types, many remain undefined. This study aimed to chart the in vitro development timeline of the inner ear organoid to understand the mechanisms at play. Using single-cell RNA sequencing at ten stages during the first 36 days of differentiation, we tracked the evolution from pluripotency to various ear cell types after exposure to specific signaling modulators. Our findings showcase gene expression that influences differentiation, identifying a plethora of ectodermal and mesenchymal cell types. We also discern aspects of the organoid model consistent with in vivo development, while highlighting potential discrepancies. Our study establishes the Inner Ear Organoid Developmental Atlas (IODA), offering deeper insights into human biology and improving inner ear tissue differentiation.

Indexed as

Ear, InnerAnimalsCell DifferentiationCells, CulturedHair Cells, AuditoryHumansOrganoidsCell differentiationInner earOrganoidsPluripotent stem cellsSingle-cell genomics

Identifiers

PMID37796037
PMCPMC10698753
OpenAlexW4387357383

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.