Evidence map›Paper›PMID 37800171›Full record

ReviewBirth defects research2023

SETting up the genome: KMT2D and KDM6A genomic function in the Kabuki syndrome craniofacial developmental disorder.

Karl B Shpargel, Gabrielle Quickstad

Open access · hybridAbstract readReview
In one paragraph

Review in Birth defects research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Karl B ShpargelDepartment of Genetics, University of North Carolina, Chapel Hill, North Carolina, USA.ORCID 0000-0002-9658-456X
Gabrielle QuickstadDepartment of Genetics, University of North Carolina, Chapel Hill, North Carolina, USA.
University of North Carolina at Chapel Hill · US

Funding

Enhancer activation mechanisms in cranial neural crest osteoblast differentiationR01DE030530 · NIDCR · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SHPARGEL, KARL BRYAN · 2021 to 2024
$1.4M
Enhancer activation roles and mechanisms in craniofacial developmentR56DE028553 · NIDCR · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SHPARGEL, KARL BRYAN · 2020 to 2020
$369k
NIDCR NIH HHS R01 DE030530NIDCR NIH HHS R56 DE028553
6 · The paper itself

Abstract

backgroundKabuki syndrome is a congenital developmental disorder that is characterized by distinctive facial gestalt and skeletal abnormalities. Although rare, the disorder shares clinical features with several related craniofacial syndromes that manifest from mutations in chromatin-modifying enzymes. Collectively, these clinical studies underscore the crucial, concerted functions of chromatin factors in shaping developmental genome structure and driving cellular transcriptional states. Kabuki syndrome predominantly results from mutations in KMT2D, a histone H3 lysine 4 methylase, or KDM6A, a histone H3 lysine 27 demethylase.

aimsIn this review, we summarize the research efforts to model Kabuki syndrome in vivo to understand the cellular and molecular mechanisms that lead to the craniofacial and skeletal pathogenesis that defines the disorder. DISCUSSION: As several studies have indicated the importance of KMT2D and KDM6A function through catalytic-independent mechanisms, we highlight noncanonical roles for these enzymes as recruitment centers for alternative chromatin and transcriptional machinery.

Indexed as

Developmental DisabilitiesHistonesLysineAbnormalities, MultipleChildChromatinCraniofacial AbnormalitiesDNA-Binding ProteinsFaceGenomicsHematologic DiseasesHistone DemethylasesHumansNeoplasm ProteinsVestibular DiseasesChromatinDNA-Binding ProteinsHistone DemethylasesHistonesKDM6A protein, humanKMT2D protein, humanLysineNeoplasm Proteinscraniofacial and skeletal disorderhistone methylaseKabuki syndromeKMT2DMLL4

Identifiers

PMID37800171
PMCPMC11190966
OpenAlexW4387393301

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.