Evidence map›Paper›PMID 37813945›Full record

ArticleNature ecology & evolution2023

A multifunctional Wnt regulator underlies the evolution of rodent stripe patterns.

Matthew R Johnson, Sha Li, Christian F Guerrero-Juarez, Pearson Miller, Benjamin J Brack, Sarah A Mereby, Jorge A Moreno, Charles Y Feigin, Jenna Gaska, Jaime A Rivera-Perez and 4 more

Abstract read
In one paragraph

Article in Nature ecology & evolution, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Loss-of-function mutations inBiology letters · 2025
    Article
  5. Review
  6. Article
  7. Morphogens in the evolution of size, shape and patterning.Development (Cambridge, England) · 2024
    Review
  8. Article
  9. Article
  10. Periodic pattern formation during embryonic development.Biochemical Society transactions · 2024
    Review
  11. Development shapes the evolutionary diversification of rodent stripe patterns.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Matthew R Johnson *Department of Molecular Biology, Princeton University, Princeton, NJ, USA.ORCID 0000-0002-9369-0084
Sha Li *Department of Molecular Biology, Princeton University, Princeton, NJ, USA.
Christian F Guerrero-JuarezCarle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA.ORCID 0000-0002-6245-6412
Pearson MillerCenter for Computational Biology, Flatiron Institute, New York, NY, USA.
Benjamin J BrackDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.ORCID 0000-0001-8272-6021
Sarah A MerebyDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.ORCID 0000-0003-2600-9460
Jorge A MorenoDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.ORCID 0000-0002-9589-7214
Charles Y FeiginDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.ORCID 0000-0003-4981-5254
Jenna GaskaDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.ORCID 0000-0003-1706-9701
Jaime A Rivera-PerezFrederick National Laboratory for Cancer Research, Frederick, MA, USA.ORCID 0000-0001-5776-6291
Qing NieDepartment of Developmental and Cell Biology, University of California, Irvine, CA, USA.
Alexander PlossDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.ORCID 0000-0001-9322-7252
Stanislav Y ShvartsmanDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.
Ricardo MallarinoDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA. rmallarino@princeton.edu.ORCID 0000-0002-8971-4864

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007388 · NIGMS · PRINCETON UNIVERSITY · PI CRISTEA, ILEANA M. · 1985 to 2022
$27.4M
Methods and Logic in Molecular Biology Training ProgramT32GM148739 · NIGMS · PRINCETON UNIVERSITY · PI Ileana M. Cristea · 2023 to 2026
$3.6M
Using naturally evolved phenotypic variation to decipher the positional regulatory code of mammalian skinR35GM133758 · NIGMS · PRINCETON UNIVERSITY · PI Ricardo Mallarino · 2019 to 2026
$3.0M
Molecular mechanisms underlying spatial patterning of mammalian skinF32GM139253 · NIGMS · PRINCETON UNIVERSITY · PI JOHNSON, MATTHEW · 2020 to 2022
$170k
How to build a gliding mammal: Using natural phenotypic variation to define the molecular regulation of tissue morphogenesisF32GM139240 · NIGMS · PRINCETON UNIVERSITY · PI FEIGIN, CHARLES YAKOV · 2020 to 2022
$100k
NIGMS NIH HHS F32 GM139240NIGMS NIH HHS F32 GM139253NIGMS NIH HHS R35 GM133758NIGMS NIH HHS T32 GM007388NIGMS NIH HHS T32 GM148739
6 · The paper itself

Abstract

Animal pigment patterns are excellent models to elucidate mechanisms of biological organization. Although theoretical simulations, such as Turing reaction-diffusion systems, recapitulate many animal patterns, they are insufficient to account for those showing a high degree of spatial organization and reproducibility. Here, we study the coat of the African striped mouse (Rhabdomys pumilio) to uncover how periodic stripes form. Combining transcriptomics, mathematical modelling and mouse transgenics, we show that the Wnt modulator Sfrp2 regulates the distribution of hair follicles and establishes an embryonic prepattern that foreshadows pigment stripes. Moreover, by developing in vivo gene editing in striped mice, we find that Sfrp2 knockout is sufficient to alter the stripe pattern. Strikingly, mutants exhibited changes in pigmentation, revealing that Sfrp2 also regulates hair colour. Lastly, through evolutionary analyses, we find that striped mice have evolved lineage-specific changes in regulatory elements surrounding Sfrp2, many of which may be implicated in modulating the expression of this gene. Altogether, our results show that a single factor controls coat pattern formation by acting both as an orienting signalling mechanism and a modulator of pigmentation. More broadly, our work provides insights into how spatial patterns are established in developing embryos and the mechanisms by which phenotypic novelty originates.

Indexed as

PigmentationRodentiaAnimalsMiceReproducibility of Results

Identifiers

PMID37813945
PMCPMC10839778

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.