Evidence map›Paper›PMID 37823593›Full record

ArticleNucleic acids research2023

PML modulates epigenetic composition of chromatin to regulate expression of pro-metastatic genes in triple-negative breast cancer.

Cristina Fracassi, Martina Ugge', Mohamed Abdelhalim, Ettore Zapparoli, Matilde Simoni, Daniela Magliulo, Davide Mazza, Dejan Lazarevic, Marco J Morelli, Philippe Collas and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
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  6. Review
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  9. Review
  10. Article
  11. Article
  12. Review
  13. SAGE open medical case reports · 2024
    Article
  14. PML Body Biogenesis: A Delicate Balance of Interactions.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Cristina FracassiDivision of Experimental Oncology, IRCCS San Raffaele Scientific Institute, Milano, Italy.
Martina Ugge'Division of Experimental Oncology, IRCCS San Raffaele Scientific Institute, Milano, Italy.
Mohamed AbdelhalimDepartment of Molecular Medicine, Institute of Basic Medical Sciences, Faculty of Medicine, University of Oslo, Oslo, Norway.ORCID 0000-0002-0603-6886
Ettore ZapparoliCenter for Omics Sciences, IRCCS San Raffaele Scientific Institute, Milano, Italy.ORCID 0000-0003-4170-7902
Matilde SimoniDivision of Experimental Oncology, IRCCS San Raffaele Scientific Institute, Milano, Italy.
Daniela MagliuloDivision of Experimental Oncology, IRCCS San Raffaele Scientific Institute, Milano, Italy.
Davide MazzaExperimental Imaging Center, IRCCS San Raffaele Scientific Institute, Milano, Italy.
Dejan LazarevicCenter for Omics Sciences, IRCCS San Raffaele Scientific Institute, Milano, Italy.
Marco J MorelliCenter for Omics Sciences, IRCCS San Raffaele Scientific Institute, Milano, Italy.
Philippe CollasDepartment of Molecular Medicine, Institute of Basic Medical Sciences, Faculty of Medicine, University of Oslo, Oslo, Norway.
Rosa BernardiDivision of Experimental Oncology, IRCCS San Raffaele Scientific Institute, Milano, Italy.ORCID 0000-0002-3607-6336
Vita-Salute San Raffaele University · ITIstituti di Ricovero e Cura a Carattere Scientifico · ITOslo University Hospital · NOUniversity of Oslo · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The promyelocytic leukemia (PML) protein organizes nuclear aggregates known as PML nuclear bodies (PML-NBs), where many transcription factors localize to be regulated. In addition, associations of PML and PML-NBs with chromatin are described in various cell types, further implicating PML in transcriptional regulation. However, a complete understanding of the functional consequences of PML association to DNA in cellular contexts where it promotes relevant phenotypes is still lacking. We examined PML chromatin association in triple-negative breast cancer (TNBC) cell lines, where it exerts important oncogenic functions. We find that PML associates discontinuously with large heterochromatic PML-associated domains (PADs) that contain discrete gene-rich euchromatic sub-domains locally depleted of PML. PML promotes heterochromatic organization in PADs and expression of pro-metastatic genes embedded in these sub-domains. Importantly, this occurs outside PML-NBs, suggesting that nucleoplasmic PML exerts a relevant gene regulatory function. We also find that PML plays indirect regulatory roles in TNBC cells by promoting the expression of pro-metastatic genes outside PADs. Our findings suggest that PML is an important transcriptional regulator of pro-oncogenic metagenes in TNBC cells, via transcriptional regulation and epigenetic organization of heterochromatin domains that embed regions of local transcriptional activity.

Indexed as

ChromatinTriple Negative Breast NeoplasmsCell Line, TumorCell NucleusEpigenesis, GeneticHumansNuclear ProteinsPromyelocytic Leukemia ProteinTranscription FactorsChromatinNuclear ProteinsPML protein, humanPromyelocytic Leukemia ProteinTranscription Factors

Identifiers

PMID37823593
PMCPMC10639071
OpenAlexW4387563174

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.