Evidence mapPaperPMID 37823711Full record

Trial reportAging cell2023

Calorie restriction modulates the transcription of genes related to stress response and longevity in human muscle: The CALERIE study.

Jayanta Kumar Das, Nirad Banskota, Julián Candia, Michael E Griswold, Melissa Orenduff, Rafael de Cabo, David L Corcoran, Sai Krupa Das, Supriyo De, Kim Marie Huffman and 8 more

Open access · goldAbstract readRandomized Controlled Trial
In one paragraph

Trial report in Aging cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
5.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Trial
  5. Trial
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Energy constraint on human health.Trends in endocrinology and metabolism: TEM · 2026
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 9 institutions in 1 country.

Jayanta Kumar DasLongitudinal Studies Section, Translation Gerontology Branch, National Institute on Aging, National Institutes of Health, Baltimore, Maryland, USA.ORCID 0000-0002-7630-7194
Nirad BanskotaComputational Biology and Genomics Core, National Institute on Aging, National Institutes of Health, Baltimore, Maryland, USA.
Julián CandiaLongitudinal Studies Section, Translation Gerontology Branch, National Institute on Aging, National Institutes of Health, Baltimore, Maryland, USA.ORCID 0000-0001-5793-8989
Michael E GriswoldMIND Center, UMMC School of Medicine, Jackson, Mississippi, USA.
Melissa OrenduffDuke Molecular Physiology Institute and Department of Medicine, Duke University School of Medicine, Durham, North Carolina, USA.
Rafael de CaboTranslation Gerontology Branch, National Institute on Aging, National Institutes of Health, Baltimore, Maryland, USA.ORCID 0000-0003-2830-5693
David L CorcoranDepartment of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Sai Krupa DasEnergy Metabolism, Jean Mayer USDA Human Nutrition Research Center on Aging, Tufts University, Boston, Massachusetts, USA.ORCID 0000-0003-0788-0461
Supriyo DeComputational Biology and Genomics Core, National Institute on Aging, National Institutes of Health, Baltimore, Maryland, USA.
Kim Marie HuffmanDuke Molecular Physiology Institute and Department of Medicine, Duke University School of Medicine, Durham, North Carolina, USA.
Virginia B KrausDuke Molecular Physiology Institute and Department of Medicine, Duke University School of Medicine, Durham, North Carolina, USA.
William E KrausDuke Molecular Physiology Institute and Department of Medicine, Duke University School of Medicine, Durham, North Carolina, USA.
Corby K MartinPennington Biomedical Research Center, Louisiana State University, Baton Rouge, Louisiana, USA.
Susan B RacetteCollege of Health Solutions, Arizona State University, Phoenix, Arizona, USA.
Leanne M RedmanPennington Biomedical Research Center, Louisiana State University, Baton Rouge, Louisiana, USA.
Birgit SchillingThe Buck Institute for Research on Aging, Novato, California, USA.
Daniel W BelskyDepartment of Epidemiology & Butler Columbia Aging Center, Columbia University Mailman School of Public Health, New York City, New York, USA.ORCID 0000-0001-5463-2212
Luigi FerrucciLongitudinal Studies Section, Translation Gerontology Branch, National Institute on Aging, National Institutes of Health, Baltimore, Maryland, USA.ORCID 0000-0002-6273-1613
National Institutes of Health · USDuke University · USPennington Biomedical Research Center · USArizona State University · USBuck Institute for Research on Aging · USColumbia University · USTufts University · USUniversity of Mississippi Medical Center · USUniversity of North Carolina at Chapel Hill · US

Funding

Research BaseP30DK072476 · NIDDK · LSU PENNINGTON BIOMEDICAL RESEARCH CTR · PI ROBERT A KESTERSON · 2005 to 2026
$26.5M
Coordinating Center for CALERIEU01AG022132 · NIA · DUKE UNIVERSITY · PI KRAUS, WILLIAM E · 2002 to 2013
$24.9M
Resource Core 3 - Metabolomics CoreP30AG028716 · NIA · DUKE UNIVERSITY · PI Sarah B. Peskoe · 2006 to 2026
$24.6M
Metabolic Adaptations to Two Year Caloric RestrictionU01AG020478 · NIA · LSU PENNINGTON BIOMEDICAL RESEARCH CTR · PI RAVUSSIN, ERIC · 2002 to 2008
$13.4M
Caloric Restriction and Aging in HumansU01AG020487 · NIA · WASHINGTON UNIVERSITY · PI HOLLOSZY, JOHN O. · 2001 to 2009
$8.9M
Dietary Energy Restriction and Metabolic Aging in HumansU01AG020480 · NIA · TUFTS UNIVERSITY BOSTON · PI ROBERTS, SUSAN B · 2002 to 2008
$8.2M
ENHANCING THE CALERIE NETWORK TO ADVANCE AGING BIOLOGYR33AG070455 · NIA · DUKE UNIVERSITY · PI KIM M. HUFFMAN, WILLIAM E KRAUS · 2021 to 2026
$4.0M
Quantitative Proteomics to Develop Robust Senescence-Related Biomarkers for AgingU01AG060906 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI SCHILLING, BIRGIT · 2018 to 2022
$4.0M
Epigenetic Mechanisms Promoting LongevityR01AG054840 · NIA · DUKE UNIVERSITY · PI KRAUS, VIRGINIA · 2018 to 2022
$3.4M
An integrated exercise and bladder training intervention to reduce falls in older women with urinary incontinenceR01AG071707 · NIA · UNIVERSITY OF PENNSYLVANIA · PI ANDY, UDUAK UMOH · 2021 to 2025
$3.2M
Long-term multi-omics follow-up of the CALERIE Trial to generate new knowledge for geroscienceR01AG061378 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Daniel Walker Belsky · 2019 to 2026
$2.9M
NIA NIH HHS P30 AG028716NIA NIH HHS R01 AG054840NIA NIH HHS R01 AG061378NIA NIH HHS R01 AG071707NIA NIH HHS R33 AG070455NIA NIH HHS U01 AG020478NIA NIH HHS U01 AG020480NIA NIH HHS U01 AG020487NIA NIH HHS U01 AG022132NIA NIH HHS U01 AG060906NIDDK NIH HHS P30 DK072476
6 · The paper itself

Abstract

The lifespan extension induced by 40% caloric restriction (CR) in rodents is accompanied by postponement of disease, preservation of function, and increased stress resistance. Whether CR elicits the same physiological and molecular responses in humans remains mostly unexplored. In the CALERIE study, 12% CR for 2 years in healthy humans induced minor losses of muscle mass (leg lean mass) without changes of muscle strength, but mechanisms for muscle quality preservation remained unclear. We performed high-depth RNA-Seq (387-618 million paired reads) on human vastus lateralis muscle biopsies collected from the CALERIE participants at baseline, 12- and 24-month follow-up from the 90 CALERIE participants randomized to CR and "ad libitum" control. Using linear mixed effect model, we identified protein-coding genes and splicing variants whose expression was significantly changed in the CR group compared to controls, including genes related to proteostasis, circadian rhythm regulation, DNA repair, mitochondrial biogenesis, mRNA processing/splicing, FOXO3 metabolism, apoptosis, and inflammation. Changes in some of these biological pathways mediated part of the positive effect of CR on muscle quality. Differentially expressed splicing variants were associated with change in pathways shown to be affected by CR in model organisms. Two years of sustained CR in humans positively affected skeletal muscle quality, and impacted gene expression and splicing profiles of biological pathways affected by CR in model organisms, suggesting that attainable levels of CR in a lifestyle intervention can benefit muscle health in humans.

Indexed as

Caloric RestrictionLongevityHumansMuscle, SkeletalMuscle Strengthcalorie restrictionFOXOheat shock responseinflammationmitochondrial biogenesisskeletal musclesplicing

Identifiers

PMID37823711
PMCPMC10726900
OpenAlexW4387563334

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.