Evidence map›Paper›PMID 37827122›Full record

ArticleCell host & microbe2023

High-throughput identification of Toxoplasma gondii effector proteins that target host cell transcription.

Simon Butterworth, Kristina Kordova, Sambamurthy Chandrasekaran, Kaitlin K Thomas, Francesca Torelli, Eloise J Lockyer, Amelia Edwards, Robert Goldstone, Anita A Koshy, Moritz Treeck

Open access · hybridAbstract read
In one paragraph

Article in Cell host & microbe, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 3 countries.

Simon ButterworthSignalling in Apicomplexan Parasites Laboratory, The Francis Crick Institute, London NW1 1AT, UK.
Kristina KordovaSignalling in Apicomplexan Parasites Laboratory, The Francis Crick Institute, London NW1 1AT, UK.
Sambamurthy ChandrasekaranBIO5 Institute, University of Arizona, Tucson, AZ 85719, USA.
Kaitlin K ThomasBIO5 Institute, University of Arizona, Tucson, AZ 85719, USA.
Francesca TorelliSignalling in Apicomplexan Parasites Laboratory, The Francis Crick Institute, London NW1 1AT, UK.
Eloise J LockyerSignalling in Apicomplexan Parasites Laboratory, The Francis Crick Institute, London NW1 1AT, UK.
Amelia EdwardsAdvanced Sequencing Facility, The Francis Crick Institute, London NW1 1AT, UK.
Robert GoldstoneAdvanced Sequencing Facility, The Francis Crick Institute, London NW1 1AT, UK.
Anita A KoshyBIO5 Institute, University of Arizona, Tucson, AZ 85719, USA; Department of Immunobiology, University of Arizona, Tucson, AZ 85719, USA; Department of Neurology, University of Arizona, Tucson, AZ 85719, USA.
Moritz TreeckSignalling in Apicomplexan Parasites Laboratory, The Francis Crick Institute, London NW1 1AT, UK; Cell Biology of Host-Pathogen Interaction Laboratory, Instituto Gulbenkian de Ciência, Oeiras 2780-156, Portugal. Electronic address: mtreeck@igc.gulbenkian.pt.
The Francis Crick Institute · GBUniversity of Arizona · US

Funding

Neuronal Latency and ToxoplasmaR01AI157247 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI CHRISTOPHER A HUNTER, Anita Koshy · 2020 to 2026
$4.7M
NIAID NIH HHS R01 AI157247Wellcome Trust CC0199Wellcome Trust CC2132
6 · The paper itself

Abstract

Intracellular pathogens and other endosymbionts reprogram host cell transcription to suppress immune responses and recalibrate biosynthetic pathways. This reprogramming is critical in determining the outcome of infection or colonization. We combine pooled CRISPR knockout screening with dual host-microbe single-cell RNA sequencing, a method we term dual perturb-seq, to identify the molecular mediators of these transcriptional interactions. Applying dual perturb-seq to the intracellular pathogen Toxoplasma gondii, we are able to identify previously uncharacterized effector proteins and directly infer their function from the transcriptomic data. We show that TgGRA59 contributes to the export of other effector proteins from the parasite into the host cell and identify an effector, TgSOS1, that is necessary for sustained host STAT6 signaling and thereby contributes to parasite immune evasion and persistence. Together, this work demonstrates a tool that can be broadly adapted to interrogate host-microbe transcriptional interactions and reveal mechanisms of infection and immune evasion.

Indexed as

ToxoplasmaGene Expression ProfilingImmune EvasionProtozoan ProteinsSignal TransductionTranscriptomeProtozoan ProteinsCRISPR screeningeffector proteinshost-microbe interactionshost-pathogen interactionsimmune evasionperturb-seqsingle-cell RNA sequencingSTAT6Toxoplasma gondii

Identifiers

PMID37827122
PMCPMC12033024
OpenAlexW4387527974

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.