Evidence map›Paper›PMID 37864153›Full record

SynthesisBMC infectious diseases2023

A systematic review of the data, methods and environmental covariates used to map Aedes-borne arbovirus transmission risk.

Ah-Young Lim, Yalda Jafari, Jamie M Caldwell, Hannah E Clapham, Katy A M Gaythorpe, Laith Hussain-Alkhateeb, Michael A Johansson, Moritz U G Kraemer, Richard J Maude, Clare P McCormack and 9 more

Abstract readSystematic Review
In one paragraph

Synthesis in BMC infectious diseases, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Strategies forOne health (Amsterdam, Netherlands) · 2026
    Review
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  19. Modeling zoonotic and vector-borne viruses.Current opinion in virology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Ah-Young LimDepartment of Infectious Disease Epidemiology and Dynamics, Faculty of Epidemiology and Population Health, London School of Hygiene & Tropical Medicine, London, UK. Ahyoung.Lim@lshtm.ac.uk.
Yalda JafariMahidol Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand.
Jamie M CaldwellHigh Meadows Environmental Institute, Princeton University, Princeton, NJ, USA.
Hannah E ClaphamSaw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore, Singapore.
Katy A M GaythorpeMRC Centre for Global Infectious Disease Analysis, School of Public Health, Imperial College London, London, UK.
Laith Hussain-AlkhateebSchool of Public Health and Community Medicine, Sahlgrenska Academy, Institute of Medicine, Global Health, University of Gothenburg, Gothenburg, Sweden.
Michael A JohanssonDengue Branch, Division of Vector-Borne Diseases, Centers for Disease Control and Prevention, San Juan, Puerto Rico, USA.
Moritz U G KraemerDepartment of Biology, University of Oxford, Oxford, UK.
Richard J MaudeMahidol Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand.
Clare P McCormackMRC Centre for Global Infectious Disease Analysis, School of Public Health, Imperial College London, London, UK.
Jane P MessinaSchool of Geography and the Environment, University of Oxford, Oxford, UK.
Erin A MordecaiDepartment of Biology, Stanford University, Stanford, CA, USA.
Ingrid B RabeDepartment of Epidemic and Pandemic Preparedness and Prevention, World Health Organization, Geneva, Switzerland.
Robert C ReinerInstitute for Health Metrics and Evaluation, University of Washington, Seattle, WA, USA.
Sadie J RyanDepartment of Geography and Emerging Pathogens Institute, University of Florida, Gainesville, FL, USA.
Henrik SaljeDepartment of Genetics, University of Cambridge, Cambridge, UK.
Jan C SemenzaDepartment of Public Health and Clinical Medicine, Section of Sustainable Health, Umeå University, Umeå, Sweden.
Diana P RojasDepartment of Epidemic and Pandemic Preparedness and Prevention, World Health Organization, Geneva, Switzerland.
Oliver J BradyDepartment of Infectious Disease Epidemiology and Dynamics, Faculty of Epidemiology and Population Health, London School of Hygiene & Tropical Medicine, London, UK.

Funding

The child health impacts of overlapping vector-borne diseases in KenyaR01AI102918 · NIAID · STANFORD UNIVERSITY · PI Angelle Desiree LaBeaud · 2013 to 2026
$7.7M
Leveraging environmental drivers to predict vector-borne disease transmissionR35GM133439 · NIGMS · STANFORD UNIVERSITY · PI Erin Mordecai · 2019 to 2026
$3.2M
Modeling the influence of temperature on the evolution of vector-virus interactionsR01AI168097 · NIAID · WADSWORTH CENTER · PI Alexander Timothy Ciota · 2022 to 2026
$2.4M
Medical Research Council MR/V031112/1NIAID NIH HHS R01 AI102918NIAID NIH HHS R01 AI168097NIGMS NIH HHS R35 GM133439NIH HHS R35GM133439, R01AI168097, R01AI102918Wellcome TrustWellcome Trust grant number 220211World Health Organization 001
6 · The paper itself

Abstract

backgroundAedes (Stegomyia)-borne diseases are an expanding global threat, but gaps in surveillance make comprehensive and comparable risk assessments challenging. Geostatistical models combine data from multiple locations and use links with environmental and socioeconomic factors to make predictive risk maps. Here we systematically review past approaches to map risk for different Aedes-borne arboviruses from local to global scales, identifying differences and similarities in the data types, covariates, and modelling approaches used.

methodsWe searched on-line databases for predictive risk mapping studies for dengue, Zika, chikungunya, and yellow fever with no geographical or date restrictions. We included studies that needed to parameterise or fit their model to real-world epidemiological data and make predictions to new spatial locations of some measure of population-level risk of viral transmission (e.g. incidence, occurrence, suitability, etc.).

resultsWe found a growing number of arbovirus risk mapping studies across all endemic regions and arboviral diseases, with a total of 176 papers published 2002-2022 with the largest increases shortly following major epidemics. Three dominant use cases emerged: (i) global maps to identify limits of transmission, estimate burden and assess impacts of future global change, (ii) regional models used to predict the spread of major epidemics between countries and (iii) national and sub-national models that use local datasets to better understand transmission dynamics to improve outbreak detection and response. Temperature and rainfall were the most popular choice of covariates (included in 50% and 40% of studies respectively) but variables such as human mobility are increasingly being included. Surprisingly, few studies (22%, 31/144) robustly tested combinations of covariates from different domains (e.g. climatic, sociodemographic, ecological, etc.) and only 49% of studies assessed predictive performance via out-of-sample validation procedures.

conclusionsHere we show that approaches to map risk for different arboviruses have diversified in response to changing use cases, epidemiology and data availability. We identify key differences in mapping approaches between different arboviral diseases, discuss future research needs and outline specific recommendations for future arbovirus mapping.

Indexed as

AedesArbovirusesArbovirus InfectionsChikungunya FeverDengueYellow FeverZika VirusZika Virus InfectionAnimalsHumansMosquito VectorsAedes-borne diseasesArbovirusesChikungunyaDengueGeostatistical modelsPredictive modellingRisk mappingYellow feverZika

Identifiers

PMID37864153
PMCPMC10588093

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.