Evidence map›Paper›PMID 37878199›Full record

ArticleBotanical studies2023

Diverse Xylaria in the Ecuadorian Amazon and their mode of wood degradation.

Nickolas N Rajtar, Joshua C Kielsmeier-Cook, Benjamin W Held, Cristina E Toapanta-Alban, Maria E Ordonez, Charles W Barnes, Robert A Blanchette

Open access · goldAbstract read
In one paragraph

Article in Botanical studies, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Draft genome dataset ofData in brief · 2026
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  2. Morphological Diversity and Preliminary DNA Barcoding ofJournal of fungi (Basel, Switzerland) · 2026
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  7. Review
  8. Multi-Gene Phylogenetic Analyses RevealsJournal of fungi (Basel, Switzerland) · 2024
    Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Nickolas N RajtarDepartment of Plant Pathology, University of Minnesota, St. Paul, MN, 55108, USA. Rajta010@umn.edu.ORCID http://orcid.org/0000-0002-3220-0950
Joshua C Kielsmeier-CookDepartment of Plant Pathology, University of Minnesota, St. Paul, MN, 55108, USA.
Benjamin W HeldDepartment of Plant Pathology, University of Minnesota, St. Paul, MN, 55108, USA.
Cristina E Toapanta-AlbanDepartment of Plant Pathology, University of Minnesota, St. Paul, MN, 55108, USA.
Maria E OrdonezQCAM Fungarium, Pontificia Universidad Católica del Ecuador, Quito, Ecuador.
Charles W BarnesForest Health Protection-Region 5, USDA Forest Service, San Bernardino, CA, 92408, USA.
Robert A BlanchetteDepartment of Plant Pathology, University of Minnesota, St. Paul, MN, 55108, USA.
University of Minnesota · USUniversity of California, Riverside · USUS Forest Service · US

Funding

USDA Hatch Project MIN-22-081
6 · The paper itself

Abstract

backgroundXylaria is a diverse and ecologically important genus in the Ascomycota. This paper describes the xylariaceous fungi present in an Ecuadorian Amazon Rainforest and investigates the decay potential of selected Xylaria species. Fungi were collected at Yasuní National Park, Ecuador during two collection trips to a single hectare plot divided into a 10-m by 10-m grid, providing 121 collection points. All Xylaria fruiting bodies found within a 1.2-m radius of each grid point were collected. Dried fruiting bodies were used for culturing and the internal transcribed spacer region was sequenced to identify Xylaria samples to species level. Agar microcosms were used to assess the decay potential of three selected species, two unknown species referred to as Xylaria 1 and Xylaria 2 and Xylaria curta, on four different types of wood from trees growing in Ecuador including balsa (Ochroma pyramidale), melina (Gmelina arborea), saman (Samanea saman), and moral (Chlorophora tinctoria). ANOVA and post-hoc comparisons were used to test for differences in biomass lost between wood blocks inoculated with Xylaria and uninoculated control blocks. Scanning electron micrographs of transverse sections of each wood and assay fungus were used to assess the type of degradation present.

results210 Xylaria collections were sequenced, with 106 collections belonging to 60 taxa that were unknown species, all with less than 97% match to NCBI reference sequences. Xylaria with sequence matches of 97% or greater included X. aff. comosa (28 isolates), X. cuneata (9 isolates) X. curta and X. oligotoma (7 isolates), and X. apiculta (6 isolates)., All Xylaria species tested were able to cause type 1 or type 2 soft rot degradation in the four wood types and significant biomass loss was observed compared to the uninoculated controls. Balsa and melina woods had the greatest amount of biomass loss, with as much as 60% and 25% lost, respectively, compared to the controls.

conclusionsXylaria species were found in extraordinary abundance in the Ecuadorian rainforest studied. Our study demonstrated that the Xylaria species tested can cause a soft rot type of wood decay and with the significant amount of biomass loss that occurred within a short incubation time, it indicates these fungi likely play a significant role in nutrient cycling in the Amazonian rainforest.

Indexed as

EcuadorFungiTropical rainforestWood decayXylariales

Identifiers

PMID37878199
PMCPMC10600087
OpenAlexW4387930814

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.