ArticleBMC plant biology2023
Multichromosomal mitochondrial genome of Punica granatum: comparative evolutionary analysis and gene transformation from chloroplast genomes.
Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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20 citing papers in PubMed.
- Assembly and characterization of the first complete mitochondrial genome of Epimedium sagittatum (Sieb. et Zucc.) Maxim (Berberidaceae):an invaluable traditional Chinese medicine.BMC plant biology · 2026Article
- The complete mitochondrial genome of Prinsepia uniflora (Rosaceae): De novo assembly, characterization, and phylogenetic analysis.BMC genomics · 2026Article
- Structural characterization of the plastid genome and comparative mitochondrial genomics of Eupatorium lindleyanum (Asteraceae): evolutionary dynamics and phylogenetic insights.BMC plant biology · 2026Article
- Complete Mitochondrial Genome Sequence Structure and Phylogenetic Analysis of Choy Sum (International journal of molecular sciences · 2026Article
- The mitochondrial and chloroplast genomes ofFrontiers in plant science · 2026Article
- Assembly and comparative analysis of the complete multichromosomal mitochondrial genome of an endangered orchid species,Frontiers in plant science · 2026Article
- Mitochondrial genome assembly and analysis of Cercis chinensis: insights into an economically valuable ornamental species.BMC plant biology · 2025Article
- Assembly and comparative analysis of chromosomal mitochondrial genomes in multiple Medicago species.BMC plant biology · 2025Article
- The first complete mitochondrial genome of Eucommia ulmoides: a multi-chromosomal architecture and controversial phylogenetic relationship in asterids.BMC plant biology · 2025Article
- De-novo assembly and comparative analysis of the complete mitogenome of traditional Chinese medicine Strobilanthes sarcorrhiza.BMC plant biology · 2025Article
- Assembly and analysis of the complete mitochondrial genome of an endemic Camellia species of China, Camellia tachangensis.BMC genomics · 2025Article
- Article
- Assembly and comparative analysis of the complete mitochondrial of Spodiopogon sagittifolius, an endemic and protective species from Yunnan, China.BMC plant biology · 2025Article
- Assembly and comparative analysis of the complete mitochondrial genome of red raspberry (Rubus idaeus L.) revealing repeat-mediated recombination and gene transfer.BMC plant biology · 2025Article
- Response of Pedunculate Oak (Plants (Basel, Switzerland) · 2025Review
- Unveiling the complete organelle genomes ofFrontiers in plant science · 2025Article
- Characterization and phylogenetic analysis of the first complete mitochondrial genome sequence of threeFrontiers in plant science · 2025Article
- Assembly and comparative analysis of the multichromosomal mitochondrial genome of globally endangered seagrass Halophila beccarii.BMC plant biology · 2024Article
- Assembly and comparative analysis of the complete mitochondrial and chloroplast genome of Cyperus stoloniferus (Cyperaceae), a coastal plant possessing saline-alkali tolerance.BMC plant biology · 2024Article
- Assembly and comparative analysis of the complete mitochondrial genome of Brassica rapa var. Purpuraria.BMC genomics · 2024Article
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6 authors.
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Abstract
backgroundPunica granatum is a fundamentally important fruit tree that has important economic, medicinal and ornamental properties. At present, there are few reports on the mitochondrial genome of pomegranate. Hence, in this study the P. granatum mitogenome was sequenced and assembled to further understanding of organization, variation, and evolution of mitogenomes of this tree species.
resultsThe genome structure was multi-chromosomes with seven circular contigs, measuring 382,774 bp in length with a 45.91% GC content. It contained 74 genes, including 46 protein-coding genes, 25 tRNA genes, and three rRNA genes. There were 188 pairs of dispersed repeats with lengths of 30 or greater, primarily consisting of reverse complementary repeats. The mitogenome analysis identified 114SSRs and 466 RNA editing sites. Analyses of codon usage, nucleotide diversity and gene migration from chloroplast to mitochondrial were also conducted. The collinear and comparative analysis of mitochondrial structures between P. granatum and its proximal species indicated that P. granatum 'Taishanhong' was closely related to P. granatum 'Qingpitian' and Lagerstroemia indica. Phylogenetic examination based on the mitogenome also confirmed the evolutionary relationship.
conclusionThe results offered crucial information on the evolutionary biology of pomegranate and highlighted ways to promote the utilization of the species' germplasm.
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