Evidence map›Paper›PMID 37901434›Full record

ArticleFrontiers in neuroscience2023

The TMEM106B T186S coding variant increases neurite arborization and synaptic density in primary hippocampal neurons.

Quynh Nguyen, Caleb A Wood, Peter J Kim, Joanna L Jankowsky

Open access · goldAbstract read
In one paragraph

Article in Frontiers in neuroscience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Quynh NguyenDepartments of Neuroscience, Baylor College of Medicine, Houston, TX, United States.
Caleb A WoodDepartments of Neuroscience, Baylor College of Medicine, Houston, TX, United States.
Peter J KimDepartments of Neuroscience, Baylor College of Medicine, Houston, TX, United States.
Joanna L JankowskyDepartments of Neuroscience, Baylor College of Medicine, Houston, TX, United States.
Baylor College of Medicine · US

Funding

TMEM106b as a lysosomal adaptor to influence brain aging and tau pathogenesisP01AG066606 · NIA · BAYLOR COLLEGE OF MEDICINE · PI ZHENG, HUI · 2021 to 2025
$13.5M
Plasticity of the entorhinal-hippocampal circuit as a vulnerability in Alzheimer’s DiseaseRF1AG058188 · NIA · BAYLOR COLLEGE OF MEDICINE · PI JANKOWSKY, JOANNA L · 2017 to 2020
$3.2M
Modeling genetic modifiers of cognitive reserve in ADR21AG056028 · NIA · BAYLOR COLLEGE OF MEDICINE · PI JANKOWSKY, JOANNA L · 2017 to 2018
$436k
Circuit-based mechanisms of neuronal vulnerability in the adult ECF31AG067676 · NIA · BAYLOR COLLEGE OF MEDICINE · PI WOOD, CALEB · 2021 to 2023
$140k
NIA NIH HHS F31 AG067676NIA NIH HHS P01 AG066606NIA NIH HHS R21 AG056028NIA NIH HHS RF1 AG058188
6 · The paper itself

Abstract

The lysosomal protein TMEM106B was identified as a risk modifier of multiple dementias including frontotemporal dementia and Alzheimer's disease. The gene comes in two major haplotypes, one associated with disease risk, and by comparison, the other with resilience. Only one coding polymorphism distinguishes the two alleles, a threonine-to-serine substitution at residue 185 (186 in mouse), that is inherited in disequilibrium with multiple non-coding variants. Transcriptional studies suggest synaptic, neuronal, and cognitive preservation in human subjects with the protective haplotype, while murine

Indexed as

coding variantknock-in mouseknock-out mouseneuron developmentprimary hippocampal neuronsynapseT185STMEM106B

Identifiers

PMID37901434
PMCPMC10603297
OpenAlexW4387607659

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.