Evidence map›Paper›PMID 37904084›Full record

ArticleBMC bioinformatics2023

Raman spectroscopy-based prediction of ofloxacin concentration in solution using a novel loss function and an improved GA-CNN model.

Chenyu Ma, Yuanbo Shi, Yueyang Huang, Gongwei Dai

Abstract read
In one paragraph

Article in BMC bioinformatics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

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0 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Chenyu MaSchool of Information and Control Engineering, Liaoning Petrochemical University, Fushun, 113001, China.
Yuanbo ShiSchool of Artificial Intelligence and Software, Liaoning Petrochemical University, Fushun, 113001, China. syb2011@yeah.net.
Yueyang HuangSchool of Information and Control Engineering, Liaoning Petrochemical University, Fushun, 113001, China.
Gongwei DaiSchool of Artificial Intelligence and Software, Liaoning Petrochemical University, Fushun, 113001, China.

Funding

Department of Education of Liaoning Province LJKMZ20220737
6 · The paper itself

Abstract

backgroundA Raman spectroscopy method can quickly and accurately measure the concentration of ofloxacin in solution. This method has the advantages of accuracy and rapidity over traditional detection methods. However, the manual analysis methods for the collected Raman spectral data often ignore the nonlinear characteristics of the data and cannot accurately predict the concentration of the target sample.

methodsTo address this drawback, this paper proposes a novel kernel-Huber loss function that combines the Huber loss function with the Gaussian kernel function. This function is used with an improved genetic algorithm-convolutional neural network (GA-CNN) to model and predict the Raman spectral data of different concentrations of ofloxacin in solution. In addition, the paper introduces recurrent neural networks (RNN), long short-term memory (LSTM), bidirectional long short-term memory (BiLSTM) and gated recurrent units (GRU) models to conduct multiple experiments and use root mean square error (RMSE) and residual predictive deviation (RPD) as evaluation metrics.

resultsThe proposed method achieved an [Formula: see text] of 0.9989 on the test set data and improved by 3% over the traditional CNN. Multiple experiments were also conducted using RNN, LSTM, BiLSTM, and GRU models and evaluated their performance using RMSE, RPD, and other metrics. The results showed that the proposed method consistently outperformed these models.

conclusionsThis paper demonstrates the effectiveness of the proposed method for predicting the concentration of ofloxacin in solution based on Raman spectral data, in addition to discussing the advantages and limitations of the proposed method, and the study proposes a solution to the problem of deep learning methods for Raman spectral concentration prediction.

Indexed as

Neural Networks, ComputerSpectrum Analysis, RamanAlgorithmsOfloxacinOfloxacinConcentration predictionGenetic algorithm-convolutional neural networkKernel-Huber loss functionOfloxacinRaman spectroscopy

Identifiers

PMID37904084
PMCPMC10617066

What Socratic holds

Textmetadata
LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.