ArticleScientific data2023
Gap-free genome assembly of Salangid icefish Neosalanx taihuensis.
Article in Scientific data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed.
- A telomere-to-telomere reference genome assembly of the Hypomesus nipponensis.Scientific data · 2026Article
- A complete telomere-to-telomere assembly of Oryza sativa L. subsp. indica Kato T197 genome.Scientific data · 2025Article
- Genome assembly resources of genitourinary cancers for chromosomal aberration at the single nucleotide level.Scientific data · 2025Article
- Chromosome-level genome assembly of Jaguar guapote (Parachromis manguensis) by massive parallel sequencing.Scientific data · 2025Article
- Near complete genome assembly of Yadong trout (Salmo trutta).Scientific data · 2025Article
- A telomere-to-telomere genome assembly of koi carp (Cyprinus carpio) using long reads and Hi-C technology.GigaScience · 2025Article
- Telomere-to-telomere genome and resequencing of 231 individuals reveal evolution, genomic footprints in Asian icefish, Protosalanx chinensis.GigaScience · 2025Article
- Telomere-to-telomere genome of common bean (Phaseolus vulgaris L., YP4).GigaScience · 2025Article
- Telomere-to-telomere genome and resequencing of 254 individuals reveal evolution, genomic footprints in Asian icefish, Protosalanx chinensis.GigaScience · 2025Article
- Study on the regulation of tea polyphenols on the structure and gel properties of myofibrillar protein fromFood chemistry: X · 2025Article
- A complete reference genome of broomcorn millet.Scientific data · 2024Article
- Gap-free genome assembly of Salangid icefish Neosalanx taihuensis.Scientific data · 2023Article
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Authors and funding
11 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Neosalanx taihuensis is widely distributed in freshwater and brackish water areas in China. Due to its high commercial value, it has been artificially introduced into many lakes and reservoirs, showing strong ecological adaptability. Here, a gap-free chromosome-level reference genome was constructed by combining short reads, PacBio HiFi long reads, Nanopore ultralong reads and Hi-C data. The reference genome of N. taihuensis was 397.29 Mb with a contig N50 of 15.61 Mb. The assembled sequences were anchored to 28 chromosomes. Furthermore, 20,024 protein-coding genes and 98.16% of the predicted genes were annotated in publicly available biological databases. This high-quality gap-free assembled genome will provide an essential reference for studying the evolution and ecological adaptability of N. taihuensis.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.