Evidence map›Paper›PMID 37928259›Full record

ArticleInternational journal of biological sciences2023

A novel lncRNA-mediated epigenetic regulatory mechanism in periodontitis.

Zoe Xiaofang Zhu, Yao Liu, Jinghao Wang, Ying Xie, Rachel Yuantong Li, Qian Ma, Qisheng Tu, Neiman A Melhem, Sandrine Couldwell, Rady E El-Araby and 5 more

Open access · goldAbstract read
In one paragraph

Article in International journal of biological sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Noncoding RNAs in periodontitis: Progress and perspectives (Review).International journal of molecular medicine · 2025
    Review
  6. Review
  7. Article
  8. mInternational journal of molecular sciences · 2025
    Article
  9. Review
  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Zoe Xiaofang ZhuDivision of Oral Biology, Tufts University School of Dental Medicine, 136 Harrison Ave, M&V Building Room 830, Boston, MA 02111, United States.
Yao LiuState Key Laboratory of Oral Diseases & National Clinical Research Center for Oral Diseases & Department of Oral and Maxillofacial Surgery, West China Hospital of Stomatology, Sichuan University, Chengdu, 610041, Sichuan, China.
Jinghao WangDivision of Oral Biology, Tufts University School of Dental Medicine, 136 Harrison Ave, M&V Building Room 830, Boston, MA 02111, United States.
Ying XieDivision of Oral Biology, Tufts University School of Dental Medicine, 136 Harrison Ave, M&V Building Room 830, Boston, MA 02111, United States.
Rachel Yuantong LiDivision of Oral Biology, Tufts University School of Dental Medicine, 136 Harrison Ave, M&V Building Room 830, Boston, MA 02111, United States.
Qian MaDivision of Oral Biology, Tufts University School of Dental Medicine, 136 Harrison Ave, M&V Building Room 830, Boston, MA 02111, United States.
Qisheng TuDivision of Oral Biology, Tufts University School of Dental Medicine, 136 Harrison Ave, M&V Building Room 830, Boston, MA 02111, United States.
Neiman A MelhemDivision of Oral Biology, Tufts University School of Dental Medicine, 136 Harrison Ave, M&V Building Room 830, Boston, MA 02111, United States.
Sandrine CouldwellDivision of Oral Biology, Tufts University School of Dental Medicine, 136 Harrison Ave, M&V Building Room 830, Boston, MA 02111, United States.
Rady E El-ArabyDivision of Oral Biology, Tufts University School of Dental Medicine, 136 Harrison Ave, M&V Building Room 830, Boston, MA 02111, United States.
Albert TaiDepartment of Immunology, Tufts University School of Medicine, Boston, MA, United States.
Thomas E Van DykeClinical and Translational Research, Oral Medicine, Infection, and Immunity, Harvard School of Dental Medicine, Forsyth Institute, Boston, MA, United States.
Nadeem KarimbuxDepartment of Periodontology, Tufts University School of Dental Medicine, Boston, MA, 02211, United States.
Y Natalie JeongDepartment of Periodontology, Tufts University School of Dental Medicine, Boston, MA, 02211, United States.
Jake Jinkun ChenDivision of Oral Biology, Tufts University School of Dental Medicine, 136 Harrison Ave, M&V Building Room 830, Boston, MA 02111, United States.
Tufts University · USBaim Institute for Clinical Research · USSichuan University · CN

Funding

Mechanisms of Resolvin E1 in Periodontal RegenerationR01DE025020 · NIDCR · ADA FORSYTH INSTITUTE, INC. · PI GUASTALDI, FERNANDO, VAN DYKE, THOMAS ELLIOTT · 2015 to 2023
$4.9M
Roles of Noncoding RNA in Bone RegenerationR01DE025681 · NIDCR · TUFTS UNIVERSITY BOSTON · PI CHEN, JAKE JINKUN · 2016 to 2024
$4.5M
A Long Noncoding RNA Amerliorates Periodontitis via Distinct Epigenetic PathwaysR01DE030074 · NIDCR · TUFTS UNIVERSITY BOSTON · PI CHEN, JAKE JINKUN · 2021 to 2025
$3.5M
Therapeutic Potentials of a New Long Noncoding RNA in Diabetic Bone Wound RepairR01DK131444 · NIDDK · TUFTS UNIVERSITY BOSTON · PI JAKE JINKUN CHEN · 2022 to 2026
$2.4M
Potentials of Epigenetic Molecules in Attenuating the Phenotypes of PeriodontitisR01DE032006 · NIDCR · TUFTS UNIVERSITY BOSTON · PI JAKE JINKUN CHEN · 2023 to 2026
$2.0M
High-Throughput DNA SequencerS10OD032203 · OD · TUFTS UNIVERSITY BOSTON · PI TAI, ALBERT K · 2022 to 2022
$804k
NIDCR NIH HHS R01 DE025020NIDCR NIH HHS R01 DE025681NIDCR NIH HHS R01 DE030074NIDCR NIH HHS R01 DE032006NIDDK NIH HHS R01 DK131444NIH HHS S10 OD032203
6 · The paper itself

Abstract

Periodontitis is a highly prevalent chronic inflammatory disease with an exaggerated host immune response, resulting in periodontal tissue destruction and potential tooth loss. The long non-coding RNA, LncR-ANRIL, located on human chromosome 9p21, is recognized as a genetic risk factor for various conditions, including atherosclerosis, periodontitis, diabetes, and cancer. LncR-APDC is an ortholog of ANRIL located on mouse genome chr4. This study aims to comprehend the regulatory role of lncR-APDC in periodontitis progression. Our experimental findings, obtained from lncR-APDC gene knockout (KO) mice with induced experimental periodontitis (EP), revealed exacerbated bone loss and disrupted pro-inflammatory cytokine regulation. Downregulation of osteogenic differentiation occurred in bone marrow stem cells harvested from lncR-APDC-KO mice. Furthermore, single-cell RNA sequencing of periodontitis gingival tissue revealed alterations in the proportion and function of immune cells, including T and B cells, macrophages, and neutrophils, due to lncR-APDC silencing. Our findings also unveiled a previously unidentified epithelial cell subset that is distinctively presenting in the lncR-APDC-KO group. This epithelial subset, characterized by the positive expression of

Indexed as

PeriodontitisRNA, Long NoncodingAnimalsCytokinesEpigenesis, GeneticHumansMiceMice, KnockoutOsteogenesisCytokinesRNA, Long Noncodingbone lossimmune responselong-noncoding RNAperiodontitissingle-cell RNA sequencing

Identifiers

PMID37928259
PMCPMC10620817
OpenAlexW4387739892

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.