Evidence map›Paper›PMID 37952972›Full record

ArticleThe Journal of veterinary medical science2024

Gene expression profiles associated with early relapse during first remission induction in canine multicentric high-grade B-cell lymphoma.

Hiroto Toyoda, Akiyoshi Tani, Yuko Goto-Koshino, Tomoki Motegi, Mika Sakamoto, Takako Mochizuki, Kei Harada, Tetsuya Kobayashi, Asuka Setoguchi, Yohei Shizuta and 8 more

Open access · diamondAbstract read
In one paragraph

Article in The Journal of veterinary medical science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Review of Molecular Technologies for Investigating Canine Cancer.Animals : an open access journal from MDPI · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 7 institutions in 2 countries.

Hiroto ToyodaDepartment of Veterinary Internal Medicine, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Akiyoshi TaniDepartment of Veterinary Internal Medicine, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Yuko Goto-KoshinoVeterinary Medical Center, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Tomoki MotegiBoston University School of Medicine, Department of Medicine, Division of Computational Biomedicine, Boston, MA, USA.
Mika SakamotoGenome Informatics Laboratory, National Institute of Genetics, Shizuoka, Japan.
Takako MochizukiGenome Informatics Laboratory, National Institute of Genetics, Shizuoka, Japan.
Kei HaradaJapan Small Animal Cancer Center, Saitama, Japan.
Tetsuya KobayashiJapan Small Animal Cancer Center, Saitama, Japan.
Asuka SetoguchiJASMINE Animal Referral Hospital, Kanagawa, Japan.
Yohei ShizutaBayside Animal Clinic, Kanagawa, Japan.
Takuya MizunoLaboratory of Molecular Diagnostics and Therapeutics, Joint Graduate School of Veterinary Medicine, Yamaguchi University, Yamaguchi, Japan.
Mitsuhiro IrieShikoku Veterinary Medical Center, Kagawa, Japan.
Jun NakamichiJapan Animal Referral Medical Center, Kanagawa, Japan.
Hajime TsujimotoJapan Animal Referral Medical Center, Kanagawa, Japan.
Aki OhmiVeterinary Medical Center, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Ray FukuokaVeterinary Medical Center, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Yasukazu NakamuraGenome Informatics Laboratory, National Institute of Genetics, Shizuoka, Japan.
Hirotaka TomiyasuDepartment of Veterinary Internal Medicine, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
The University of Tokyo · JPNational Institute of Genetics · JPJapan Small Animal Medical Center · JPVeterinary Medical Center · JPBoston University · USShikoku (Japan) · JPYamaguchi University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although chemotherapy using CHOP-based protocol induces remission in most cases of canine multicentric high-grade B-cell lymphoma (mhBCL), some cases develop early relapse during the first induction protocol. In this study, we examined the gene expression profiles of canine mhBCL before chemotherapy and investigated their associations with early relapse during the first whole CHOP-based protocol. Twenty-five cases of mhBCL treated with CHOP-based protocol as first induction chemotherapy were included in this study. Sixteen cases completed the first whole CHOP-based protocol without relapse (S-group), and nine developed relapse during the chemotherapy (R-group). RNA-seq was performed on samples from neoplastic lymph nodes. Differentially expressed genes (DEGs) were extracted by the comparison of gene expression profiles between S- and R-groups, and the differences in the expression levels of these genes were validated by RT-qPCR. Extracted 179 DEGs included the genes related to chemokine CC motif ligand, T-cell receptor signaling pathway, and PD-L1 expression and PD-1 checkpoint pathway. We focused on chemokine CC motif ligand, and CCL4 was confirmed to be significantly downregulated in the R-group (P=0.039). We also focused on the genes related to T-cell signaling pathway, and CD3E (P=0.039), ITK (P=0.023), and LAT (P=0.023) genes were confirmed to be significantly upregulated in the R-group. The current results suggest that both changes in tumor cells and the interactions between tumor cells and immune cells are associated with the efficacy of the chemotherapy for first remission induction.

Indexed as

Dog DiseasesLymphoma, B-CellAnimalsChemokinesChronic DiseaseDogsDoxorubicinLigandsNeoplasm Recurrence, LocalRemission InductionTranscriptomeVincristineChemokinesDoxorubicinLigandsVincristinechemokineCHOP-based protocoldogRNA-seqtumor microenvironment

Identifiers

PMID37952972
PMCPMC10849849
OpenAlexW4388608361

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.