Evidence map›Paper›PMID 37987912›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2024

TurboID-Based Proximity Labeling: A Method to Decipher Protein-Protein Interactions in Plants.

Yuanyuan Li, Yongliang Zhang, Savithramma P Dinesh-Kumar

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 0 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Yuanyuan LiDepartment of Plant Biology and The Genome Center, College of Biological Sciences, University of California, Davis, Davis, CA, USA.
Yongliang ZhangState Key Laboratory of Plant Environmental Resilience and Ministry of Agriculture Key Laboratory of Soil Microbiology, College of Biological Sciences, China Agricultural University, Beijing, China.
Savithramma P Dinesh-KumarDepartment of Plant Biology and The Genome Center, College of Biological Sciences, University of California, Davis, Davis, CA, USA. spdineshkumar@ucdavis.edu.
University of California, Davis · USChina Agricultural University · CN

Funding

Role of organelle dynamics and retrograde signaling during plant innate immunityR01GM132582 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CAPLAN, JEFFREY L, DINESH-KUMAR, SAVITHRAMMA P · 2019 to 2022
$1.9M
NIGMS NIH HHS R01 GM132582
6 · The paper itself

Abstract

Proteins form complex networks through interaction to drive biological processes. Thus, dissecting protein-protein interactions (PPIs) is essential for interpreting cellular processes. To overcome the drawbacks of traditional approaches for analyzing PPIs, enzyme-catalyzed proximity labeling (PL) techniques based on peroxidases or biotin ligases have been developed and successfully utilized in mammalian systems. However, the use of toxic H

Indexed as

BiotinHydrogen PeroxideAnimalsBiotinylationMammalsNicotianaPlantsBiotinHydrogen PeroxideBiotinylationNLR immune receptorProtein–protein interactionsProximity labelingTurboID

Identifiers

PMID37987912
PMCPMC12363416
OpenAlexW4388861954

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.