Evidence map›Paper›PMID 38044573›Full record

ArticleAging cell2024

Single-cell transcriptome characteristics of testicular terminal epithelium lineages during aging in the Drosophila.

Xia Chen, Yujuan Qi, Qiuru Huang, Chi Sun, Yanli Zheng, Li Ji, Yi Shi, Xinmeng Cheng, Zhenbei Li, Sen Zheng and 3 more

Open access · goldAbstract read
In one paragraph

Article in Aging cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Xia ChenDepartment of Obstetrics and Gynecology, Nantong First People's Hospital, Affiliated Hospital 2 of Nantong University; Medical School of Nantong University, Nantong University, Nantong, Jiangsu, China.
Yujuan QiClinical Center of Reproductive Medicine, Xuzhou Central Hospital, Xuzhou Clinical School of Xuzhou Medical University, Xuzhou, China.
Qiuru HuangInstitute of Reproductive Medicine, Medical School of Nantong University, Nantong University, Nantong, China.
Chi SunDepartment of Geriatrics, Affiliated Hospital of Nantong University, Nantong University, Nantong, China.
Yanli ZhengDepartment of Obstetrics and Gynecology, Nantong First People's Hospital, Affiliated Hospital 2 of Nantong University; Medical School of Nantong University, Nantong University, Nantong, Jiangsu, China.
Li JiInstitute of Reproductive Medicine, Medical School of Nantong University, Nantong University, Nantong, China.
Yi ShiInstitute of Reproductive Medicine, Medical School of Nantong University, Nantong University, Nantong, China.
Xinmeng ChengInstitute of Reproductive Medicine, Medical School of Nantong University, Nantong University, Nantong, China.
Zhenbei LiClinical Center of Reproductive Medicine, Xuzhou Central Hospital, Xuzhou Clinical School of Xuzhou Medical University, Xuzhou, China.
Sen ZhengClinical Center of Reproductive Medicine, Xuzhou Central Hospital, Xuzhou Clinical School of Xuzhou Medical University, Xuzhou, China.
Yijuan CaoClinical Center of Reproductive Medicine, Xuzhou Central Hospital, Xuzhou Clinical School of Xuzhou Medical University, Xuzhou, China.
Zhifeng GuDepartment of Rheumatology, Affiliated Hospital of Nantong University, Nantong University, Nantong, China.
Jun YuInstitute of Reproductive Medicine, Medical School of Nantong University, Nantong University, Nantong, China.ORCID 0000-0003-3109-4102
Nantong University · CNXuzhou Medical College · CN

Funding

Basic Science Research Program of Nantong City JC12022006Jiangsu province senile health scientific research project LR2021035National Natural Science Foundation of China 82071838National Natural Science Foundation of China 82101891Natural Science Foundation of Jiangsu Province BK20221376Research Project of Nantong Health Commission QA2021016Science and Technology Project of Nantong City JC2021119the Fund of Xuzhou Science and Technology KC20092the Nantong Key Young Medical Talent Programthe Open Fund of Jiangsu Key Laboratory for New Drug Research and Clinical PharmacyWorkstation of Academician Liu Yixun 2-2018.11.1Xuzhou Pengcheng Talents - Medical Young Reserve Talents XWRCSL20220162
6 · The paper itself

Abstract

Aging is a complex biological process leading to impaired functions, with a variety of hallmarks. In the testis of Drosophila, the terminal epithelium region is involved in spermatid release and maturation, while its functional diversity and regulatory mechanism remain poorly understood. In this study, we performed single-cell RNA-sequencing analysis (scRNA-seq) to characterize the transcriptomes of terminal epithelium in Drosophila testes at 2-, 10 and 40-Days. Terminal epithelium populations were defined with Metallothionein A (MtnA) and subdivided into six novel sub-cell clusters (EP0-EP5), and a series of marker genes were identified based on their expressions. The data revealed the functional characteristics of terminal epithelium populations, such as tight junction, focal adhesion, bacterial invasion, oxidative stress, mitochondrial function, proteasome, apoptosis and metabolism. Interestingly, we also found that disrupting genes for several relevant pathways in terminal epithelium led to male fertility disorders. Moreover, we also discovered a series of age-biased genes and pseudotime trajectory mediated state-biased genes during terminal epithelium aging. Differentially expressed genes during terminal epithelium aging were mainly participated in the regulation of several common signatures, e.g. mitochondria-related events, protein synthesis and degradation, and metabolic processes. We further explored the Drosophila divergence and selection in the functional constraints of age-biased genes during aging, revealing that age-biased genes in epithelial cells of 2 Days group evolved rapidly and were endowed with greater evolutionary advantages. scRNA-seq analysis revealed the diversity of testicular terminal epithelium populations, providing a gene target resource for further systematic research of their functions during aging.

Indexed as

DrosophilaTestisAgingAnimalsEpitheliumMaleTranscriptomeagingDrosophilasingle-cell RNA-sequencingterminal epitheliumtestis

Identifiers

PMID38044573
PMCPMC10928582
OpenAlexW4389301658

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.