Evidence map›Paper›PMID 38073021›Full record

ArticleArthritis & rheumatology (Hoboken, N.J.)2024

Local Ancestry at the Major Histocompatibility Complex Region is Not a Major Contributor to Disease Heterogeneity in a Multiethnic Lupus Cohort.

Olivia Solomon, Cristina M Lanata, Cameron Adams, Joanne Nititham, Kimberly E Taylor, Sharon A Chung, Jinoos Yazdany, Maria Dall'Era, Bernado A Pons-Estel, Teresa Tusié-Luna and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Arthritis & rheumatology (Hoboken, N.J.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it, 3 citations in OpenAlex.

  1. Pooled it
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 5 countries.

Olivia SolomonUniversity of California, Berkeley, Genetic Epidemiology and Genomic Laboratory.ORCID 0000-0003-1615-3880
Cristina M LanataNational Human Genome Research Institute, NIH, Bethesda, Maryland.ORCID 0000-0002-6017-4921
Cameron AdamsUniversity of California, Berkeley, Genetic Epidemiology and Genomic Laboratory.ORCID 0000-0003-2525-523X
Joanne NitithamNational Human Genome Research Institute, NIH, Bethesda, Maryland.
Kimberly E TaylorRussell/Engleman Rheumatology Research Center, University of California, San Francisco.
Sharon A ChungRussell/Engleman Rheumatology Research Center, University of California, San Francisco.ORCID 0000-0002-2238-2287
Jinoos YazdanyRussell/Engleman Rheumatology Research Center, University of California, San Francisco.ORCID 0000-0002-3508-4094
Maria Dall'EraRussell/Engleman Rheumatology Research Center, University of California, San Francisco.
Bernado A Pons-EstelCentro Regional de Enfermedades Autoinmunes y Reumáticas (GO-CREAR), Rosario, Argentina.
Teresa Tusié-LunaInstituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán and Instituto de Investigaciones Biomédicas de la Universidad Nacional Autónoma de México, Mexico City, Mexico.
Betty TsaoMedical University of South Carolina, Charleston, South Carolina.
Eric MorandMonash University Faculty of Medicine, Nursing & Health Sciences, Melbourne, Australia.ORCID 0000-0002-9507-3338
Marta E Alarcón-RiquelmeCenter for Genomics and Oncological Research (GENYO). Pfizer-University of Granada-Andalusian Government, Parque Tecnológico de la Salud, Granada, Spain.
Lisa F BarcellosUniversity of California, Berkeley, Genetic Epidemiology and Genomic Laboratory.ORCID 0000-0002-0303-3479
Lindsey A CriswellNational Human Genome Research Institute, NIH, Bethesda, Maryland.
University of California, San Francisco · USNational Human Genome Research Institute · USUniversity of California, Berkeley · USHospital Provincial de Rosario · ARInstituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán · MXMedical University of South Carolina · USMonash Health · AUPfizer-University of Granada-Junta de Andalucía Centre for Genomics and Oncological Research · ES

Funding

RESOURCE-BASED CENTER FOR THE ADVANCEMENT OF PRECISION MEDICINE IN RHEUMATOLOGYP30AR070155 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Mary C Nakamura · 2016 to 2026
$8.2M
Genomic studies of Systemic Lupus ErythematosusZIAHG200416 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI CRISWELL, LINDSEY · 2021 to 2025
$7.0M
Racial/ethnic and socioeconomic disparities in biologic and clinical SLE outcomesU01DP006701 · DP · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DALL'ERA, MARIA, YAZDANY, JINOOS · 2022 to 2025
$3.6M
Advancing Quality and Outcomes Measurement in RheumatologyK24AR074534 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Jinoos Yazdany · 2019 to 2026
$1.5M
NCCDPHP CDC HHS U01 DP006701NIAMS NIH HHS K24 AR074534NIAMS NIH HHS P30 AR070155
6 · The paper itself

Abstract

objectiveSystemic lupus erythematosus (SLE) is an autoimmune disease resulting in debilitating clinical manifestations that vary in severity by race and ethnicity with a disproportionate burden in African American, Mestizo, and Asian populations compared with populations of European descent. Differences in global and local genetic ancestry may shed light on the underlying mechanisms contributing to these disparities, including increased prevalence of lupus nephritis, younger age of symptom onset, and presence of autoantibodies.

methodsA total of 1,139 European, African American, and Mestizos patients with SLE were genotyped using the Affymetrix LAT1 World array. Global ancestry proportions were estimated using ADMIXTURE, and local ancestry was estimated using RFMIXv2.0. We investigated associations between lupus nephritis, age at onset, and autoantibody status with both global and local ancestry proportions within the Major Histocompatibility Complex region.

resultsOur results showed small effect sizes that did not meet the threshold for statistical significance for global or local ancestry proportions in either African American or Mestizo patients with SLE who presented with the clinical manifestations of interest compared with those who did not.

conclusionThese findings suggest that local genetic ancestry within the Major Histocompatibility Complex region is not a major contributor to these SLE manifestations among patients with SLE from admixed populations.

Indexed as

Lupus Erythematosus, SystemicLupus NephritisAutoantibodiesGenetic Predisposition to DiseaseHumansMajor Histocompatibility ComplexWhiteAutoantibodies

Identifiers

PMID38073021
PMCPMC10965360
OpenAlexW4389569170

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.