Evidence mapPaperPMID 38137356Full record

ArticleBiomedicines2023

How Deep Learning in Antiviral Molecular Profiling Identified Anti-SARS-CoV-2 Inhibitors.

Mohammed Ali, In Ho Park, Junebeom Kim, Gwanghee Kim, Jooyeon Oh, Jin Sun You, Jieun Kim, Jeon-Soo Shin, Sang Sun Yoon

Open access · goldAbstract read
In one paragraph

Article in Biomedicines, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Mohammed AliDepartment of Microbiology and Immunology, Yonsei University College of Medicine, Seoul 03722, Republic of Korea.
In Ho ParkDepartment of Biomedical Science, Yonsei University College of Medicine, Seoul 03722, Republic of Korea.ORCID 0000-0003-2190-5469
Junebeom KimDepartment of Microbiology and Immunology, Yonsei University College of Medicine, Seoul 03722, Republic of Korea.
Gwanghee KimDepartment of Microbiology and Immunology, Yonsei University College of Medicine, Seoul 03722, Republic of Korea.
Jooyeon OhDepartment of Microbiology and Immunology, Yonsei University College of Medicine, Seoul 03722, Republic of Korea.
Jin Sun YouDepartment of Microbiology and Immunology, Yonsei University College of Medicine, Seoul 03722, Republic of Korea.
Jieun KimDepartment of Microbiology and Immunology, Yonsei University College of Medicine, Seoul 03722, Republic of Korea.
Jeon-Soo ShinDepartment of Microbiology and Immunology, Yonsei University College of Medicine, Seoul 03722, Republic of Korea.
Sang Sun YoonDepartment of Microbiology and Immunology, Yonsei University College of Medicine, Seoul 03722, Republic of Korea.
Yonsei University · KR

Funding

National Research Foundation of Korea 2019R1A6A1A03032869 , 2022R1A2B5B03001446, 2022R1A2C109184512
6 · The paper itself

Abstract

The integration of artificial intelligence (AI) into drug discovery has markedly advanced the search for effective therapeutics. In our study, we employed a comprehensive computational-experimental approach to identify potential anti-SARS-CoV-2 compounds. We developed a predictive model to assess the activities of compounds based on their structural features. This model screened a library of approximately 700,000 compounds, culminating in the selection of the top 100 candidates for experimental validation. In vitro assays on human intestinal epithelial cells (Caco-2) revealed that 19 of these compounds exhibited inhibitory activity. Notably, eight compounds demonstrated dose-dependent activity in Vero cell lines, with half-maximal effective concentration (EC50) values ranging from 1 μM to 7 μM. Furthermore, we utilized a clustering approach to pinpoint potential nucleoside analog inhibitors, leading to the discovery of two promising candidates: azathioprine and its metabolite, thioinosinic acid. Both compounds showed in vitro activity against SARS-CoV-2, with thioinosinic acid also significantly reducing viral loads in mouse lungs. These findings underscore the utility of AI in accelerating drug discovery processes.

Indexed as

artificial intelligenceazathioprinecompounds librarynucleoside analogsSARS-CoV-2thioinosinic acid

Identifiers

PMID38137356
PMCPMC10740425
OpenAlexW4388969184

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.