Evidence map›Paper›PMID 38147121›Full record

ArticleInternational journal of biometeorology2024

Skin transcriptomic analysis reveals candidate genes and pathways associated with thermotolerance in hair sheep.

Messy Hannear de Andrade Pantoja, Mirele Daiana Poleti, Francisco José de Novais, Kelly Kéffny Souza Duarte, Raluca G Mateescu, Gerson Barreto Mourão, Luiz Lehmann Coutinho, Heidge Fukumasu, Cristiane Gonçalves Titto

Abstract read
PubMed Publisher
In one paragraph

Article in International journal of biometeorology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Messy Hannear de Andrade PantojaFaculdade de Zootecnia e Engenharia de Alimentos, Universidade de São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, 13635-900, Brazil.
Mirele Daiana PoletiFaculdade de Zootecnia e Engenharia de Alimentos, Universidade de São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, 13635-900, Brazil.
Francisco José de NovaisFaculdade de Zootecnia e Engenharia de Alimentos, Universidade de São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, 13635-900, Brazil.
Kelly Kéffny Souza DuarteFaculdade de Zootecnia e Engenharia de Alimentos, Universidade de São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, 13635-900, Brazil.
Raluca G MateescuDepartment of Animal Sciences, University of Florida, Gainesville, FL, USA.
Gerson Barreto MourãoEscola Superior de Agricultura Luiz de Queiroz Universidade de São Paulo, Av. Pádua Dias, 11, Piracicaba, São Paulo, Brazil.
Luiz Lehmann CoutinhoEscola Superior de Agricultura Luiz de Queiroz Universidade de São Paulo, Av. Pádua Dias, 11, Piracicaba, São Paulo, Brazil.
Heidge FukumasuFaculdade de Zootecnia e Engenharia de Alimentos, Universidade de São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, 13635-900, Brazil.
Cristiane Gonçalves TittoFaculdade de Zootecnia e Engenharia de Alimentos, Universidade de São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, 13635-900, Brazil. crisgtitto@usp.br.ORCID http://orcid.org/0000-0003-0205-227X
Universidade de São Paulo · BRUniversity of Florida · US

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 444874/2020-8Coordenação de Aperfeiçoamento de Pessoal de Nível Superior 001Fundação de Amparo à Pesquisa do Estado de São Paulo 2019/12604-4Fundação de Amparo à Pesquisa do Estado de São Paulo 2019/22226-7Fundação de Amparo à Pesquisa do Estado de São Paulo 2021/07178-6
6 · The paper itself

Abstract

The skin plays an important role in thermoregulation. Identification of genes on the skin that contribute to increased heat tolerance can be used to select animals with the best performance in warm environments. Our objective was to identify candidate genes associated with the heat stress response in the skin of Santa Ines sheep. A group of 80 sheep assessed for thermotolerance was kept in a climatic chamber for 8 days at a stress level temperature of 36 °C (10 am to 04 pm) and a maintenance temperature of 28 °C (04 pm to 10 am). Two divergent groups, with seven animals each, were formed after ranking them by thermotolerance using rectal temperature. From skin biopsy samples, total RNA was extracted, quantified, and used for RNA-seq analysis. 15,989 genes were expressed in sheep skin samples, of which 4 genes were differentially expressed (DE; FDR < 0.05) and 11 DE (FDR 0.05-0.177) between the two divergent groups. These genes are involved in cellular protection against stress (HSPA1A and HSPA6), ribosome assembly (28S, 18S, and 5S ribosomal RNA), and immune response (IGHG4, GNLY, CXCL1, CAPN14, and SAA-4). The candidate genes and main pathways related to heat tolerance in Santa Ines sheep require further investigation to understand their response to heat stress in different climatic conditions and under solar radiation. It is essential to verify whether these genes and pathways are present in different breeds and to understand the relationship between heat stress and other genes identified in this study.

Indexed as

ThermotoleranceAnimalsBody Temperature RegulationGene Expression ProfilingHeat-Shock ResponseSheepSkinHeat stressImmune responseSanta Ines

Identifiers

PMID38147121
OpenAlexW4390237294

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.