Evidence map›Paper›PMID 38153287›Full record

ArticleEnvironmental science & technology2024

A Novel Adductomics Workflow Incorporating

Chiung-Wen Hu, Yuan-Jhe Chang, Wei-Hung Chang, Marcus S Cooke, Yet-Ran Chen, Mu-Rong Chao

Open access · greenAbstract read
In one paragraph

Article in Environmental science & technology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Chiung-Wen HuDepartment of Public Health, Chung Shan Medical University, Taichung 402, Taiwan.ORCID 0000-0003-4821-7500
Yuan-Jhe ChangDepartment of Occupational Safety and Health, Chung Shan Medical University, Taichung 402, Taiwan.ORCID 0000-0002-1851-0733
Wei-Hung ChangAgricultural Biotechnology Research Center, Academia Sinica, Taipei 115, Taiwan.
Marcus S CookeOxidative Stress Group, Department of Molecular Biosciences, University of South Florida, Tampa, Florida 33620, United States.ORCID 0000-0003-0369-862X
Yet-Ran ChenAgricultural Biotechnology Research Center, Academia Sinica, Taipei 115, Taiwan.ORCID 0000-0002-2409-6655
Mu-Rong ChaoDepartment of Occupational Safety and Health, Chung Shan Medical University, Taichung 402, Taiwan.ORCID 0000-0002-1894-6887
Agricultural Biotechnology Research Center, Academia Sinica · TWChung Shan Medical University · TWChung Shan Medical University Hospital · TWUniversity of South Florida · US

Funding

Urinary DNA Adductomics for the Assessment of Exposure to Cancer Risk FactorsR01ES030557 · NIEHS · UNIVERSITY OF SOUTH FLORIDA · PI COOKE, MARCUS STANLEY, HU, CHIUNG-WEN · 2019 to 2023
$1.7M
NIEHS NIH HHS R01 ES030557
6 · The paper itself

Abstract

Exposure to the physicochemical agents that interact with nucleic acids (NA) may lead to modification of DNA and RNA (i.e., NA modifications), which have been associated with various diseases, including cancer. The emerging field of NA adductomics aims to identify both known and unknown NA modifications, some of which may also be associated with proteins. One of the main challenges for adductomics is the processing of massive and complex data generated by high-resolution tandem mass spectrometry (HR-MS/MS). To address this, we have developed a software called "

Indexed as

ExposomeNucleic AcidsDNA AdductsRNASoftwareTandem Mass SpectrometryWorkflowDNA AdductsNucleic AcidsRNAAdductsCross-linking modificationsData-dependent acquisitionExposomeHigh-resolution tandem mass spectrometryNucleic acid adductomicsSoftware

Identifiers

PMID38153287
PMCPMC11915021
OpenAlexW4390346326

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.