Evidence map›Paper›PMID 38167814›Full record

ArticleNature communications2024

A genus in the bacterial phylum Aquificota appears to be endemic to Aotearoa-New Zealand.

Jean F Power, Carlo R Carere, Holly E Welford, Daniel T Hudson, Kevin C Lee, John W Moreau, Thijs J G Ettema, Anna-Louise Reysenbach, Charles K Lee, Daniel R Colman and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 9 institutions in 4 countries.

Jean F PowerThermophile Research Unit, Te Aka Mātuatua | School of Science, Te Whare Wānanga o Waikato | University of Waikato, Hamilton, 3240, Aotearoa New Zealand.ORCID 0000-0003-4250-8892
Carlo R CarereTe Tari Pūhanga Tukanga Matū | Department of Chemical and Process Engineering, Te Whare Wānanga o Waitaha | University of Canterbury, Christchurch, 8140, Aotearoa New Zealand.ORCID 0000-0001-6275-1203
Holly E WelfordTe Kura Pūtaiao Koiora | School of Biological Sciences, Te Whare Wānanga o Waitaha | University of Canterbury, Christchurch, 8140, Aotearoa New Zealand.
Daniel T HudsonTe Tari Moromoroiti me te Ārai Mate | Department of Microbiology and Immunology, Te Whare Wānanga o Ōtākou | University of Otago, Dunedin, 9054, Aotearoa New Zealand.
Kevin C LeeTe Kura Pūtaiao | School of Science, Te Wānanga Aronui o Tāmaki Makau Rau | Auckland University of Technology, Auckland, 1010, Aotearoa New Zealand.ORCID 0000-0003-0210-2628
John W MoreauSchool of Geographical & Earth Sciences, University of Glasgow, Glasgow, G12 8RZ, UK.ORCID 0000-0002-5997-522X
Thijs J G EttemaLaboratory of Microbiology, Wageningen University & Research, 6708, WE, Wageningen, the Netherlands.ORCID 0000-0002-6898-6377
Anna-Louise ReysenbachDepartment of Biology, Portland State University, Portland, Oregon, 97207, USA.ORCID 0000-0001-9130-7750
Charles K LeeThermophile Research Unit, Te Aka Mātuatua | School of Science, Te Whare Wānanga o Waikato | University of Waikato, Hamilton, 3240, Aotearoa New Zealand.ORCID 0000-0002-6562-4733
Daniel R ColmanDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, 59717, USA.ORCID 0000-0002-3253-6833
Eric S BoydDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, MT, 59717, USA.ORCID 0000-0003-4436-5856
Xochitl C MorganTe Tari Moromoroiti me te Ārai Mate | Department of Microbiology and Immunology, Te Whare Wānanga o Ōtākou | University of Otago, Dunedin, 9054, Aotearoa New Zealand.
Ian R McDonaldThermophile Research Unit, Te Aka Mātuatua | School of Science, Te Whare Wānanga o Waikato | University of Waikato, Hamilton, 3240, Aotearoa New Zealand.
S Craig CaryThermophile Research Unit, Te Aka Mātuatua | School of Science, Te Whare Wānanga o Waikato | University of Waikato, Hamilton, 3240, Aotearoa New Zealand. caryc@waikato.ac.nz.ORCID 0000-0002-2876-2387
Matthew B StottTe Kura Pūtaiao Koiora | School of Biological Sciences, Te Whare Wānanga o Waitaha | University of Canterbury, Christchurch, 8140, Aotearoa New Zealand. matthew.stott@canterbury.ac.nz.ORCID 0000-0002-2082-9460
University of Waikato · NZUniversity of Canterbury · NZMontana State University · USAuckland University of Technology · NZHarvard University · USPortland State University · USUniversity of Glasgow · GBUniversity of Otago · NZWageningen University & Research · NL

Funding

Ministry of Business, Innovation and Employment (MBIE) C05X1203National Aeronautics and Space Administration (NASA) 80NSSC19M0150
6 · The paper itself

Abstract

Allopatric speciation has been difficult to examine among microorganisms, with prior reports of endemism restricted to sub-genus level taxa. Previous microbial community analysis via 16S rRNA gene sequencing of 925 geothermal springs from the Taupō Volcanic Zone (TVZ), Aotearoa-New Zealand, revealed widespread distribution and abundance of a single bacterial genus across 686 of these ecosystems (pH 1.2-9.6 and 17.4-99.8 °C). Here, we present evidence to suggest that this genus, Venenivibrio (phylum Aquificota), is endemic to Aotearoa-New Zealand. A specific environmental niche that increases habitat isolation was identified, with maximal read abundance of Venenivibrio occurring at pH 4-6, 50-70 °C, and low oxidation-reduction potentials. This was further highlighted by genomic and culture-based analyses of the only characterised species for the genus, Venenivibrio stagnispumantis CP.B2

Indexed as

MicrobiotaMetagenomeNew ZealandPhylogenyRNA, Ribosomal, 16SRNA, Ribosomal, 16S

Identifiers

PMID38167814
PMCPMC10762115
OpenAlexW4390512003

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.