Evidence map›Paper›PMID 38177920›Full record

ArticleEMBO reports2024

LncRNA DANA1 promotes drought tolerance and histone deacetylation of drought responsive genes in Arabidopsis.

Jingjing Cai, Yongdi Zhang, Reqing He, Liyun Jiang, Zhipeng Qu, Jinbao Gu, Jun Yang, María Florencia Legascue, Zhen-Yu Wang, Federico Ariel and 3 more

Open access · diamondAbstract read
In one paragraph

Article in EMBO reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. The Long Intergenic Noncoding RNAPlants (Basel, Switzerland) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Biological Insights and Recent Advances in Plant Long Non-Coding RNA.International journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Jingjing Cai *Key Laboratory of Molecular Biology and Gene Engineering in Jiangxi Province, College of Life Science, Nanchang University, 330031, Jiangxi, China.
Yongdi Zhang *Key Laboratory of Molecular Biology and Gene Engineering in Jiangxi Province, College of Life Science, Nanchang University, 330031, Jiangxi, China.
Reqing He *Key Laboratory of Molecular Biology and Gene Engineering in Jiangxi Province, College of Life Science, Nanchang University, 330031, Jiangxi, China.
Liyun Jiang *Key Laboratory of Molecular Biology and Gene Engineering in Jiangxi Province, College of Life Science, Nanchang University, 330031, Jiangxi, China.ORCID http://orcid.org/0000-0001-5376-2058
Zhipeng QuDepartment of Molecular and Biomedical Science, School of Biological Sciences, The University of Adelaide, Adelaide, 5005, SA, Australia.
Jinbao GuInstitute of Nanfan & Seed Industry, Guangdong Academy of Sciences, 510316, Guangdong, China.
Jun YangKey Laboratory of Molecular Biology and Gene Engineering in Jiangxi Province, College of Life Science, Nanchang University, 330031, Jiangxi, China.
María Florencia LegascueInstituto de Agrobiotecnología del Litoral, CONICET, FBCB, Universidad Nacional del Litoral, Colectora Ruta Nacional 168 km 0, Santa Fe, 3000, Argentina.
Zhen-Yu WangInstitute of Nanfan & Seed Industry, Guangdong Academy of Sciences, 510316, Guangdong, China.
Federico ArielInstituto de Agrobiotecnología del Litoral, CONICET, FBCB, Universidad Nacional del Litoral, Colectora Ruta Nacional 168 km 0, Santa Fe, 3000, Argentina.
David L AdelsonDepartment of Molecular and Biomedical Science, School of Biological Sciences, The University of Adelaide, Adelaide, 5005, SA, Australia.ORCID http://orcid.org/0000-0003-2404-5636
Youlin ZhuKey Laboratory of Molecular Biology and Gene Engineering in Jiangxi Province, College of Life Science, Nanchang University, 330031, Jiangxi, China.
Dong WangKey Laboratory of Molecular Biology and Gene Engineering in Jiangxi Province, College of Life Science, Nanchang University, 330031, Jiangxi, China. dongwang@ncu.edu.cn.ORCID http://orcid.org/0000-0003-4278-2728
Jiangxi University of Technology · CNGuangdong Academy of Sciences · CNInstituto de Agrobiotecnología del Litoral · ARThe University of Adelaide · AU

Funding

MOST | National Natural Science Foundation of China (NSFC) 31800224MOST | National Natural Science Foundation of China (NSFC) 31960138MOST | National Natural Science Foundation of China (NSFC) 32060067MOST | National Natural Science Foundation of China (NSFC) 32070627| Natural Science Foundation of Jiangxi Province (Jiangxi Natural Science Foundation) 20171ACB20001
6 · The paper itself

Abstract

Although many long noncoding RNAs have been discovered in plants, little is known about their biological function and mode of action. Here we show that the drought-induced long intergenic noncoding RNA DANA1 interacts with the L1p/L10e family member protein DANA1-INTERACTING PROTEIN 1 (DIP1) in the cell nucleus of Arabidopsis, and both DANA1 and DIP1 promote plant drought resistance. DANA1 and DIP1 increase histone deacetylase HDA9 binding to the CYP707A1 and CYP707A2 loci. DIP1 further interacts with PWWP3, a member of the PEAT complex that associates with HDA9 and has histone deacetylase activity. Mutation of DANA1 enhances CYP707A1 and CYP707A2 acetylation and expression resulting in impaired drought tolerance, in agreement with dip1 and pwwp3 mutant phenotypes. Our results demonstrate that DANA1 is a positive regulator of drought response and that DANA1 works jointly with the novel chromatin-related factor DIP1 on epigenetic reprogramming of the plant transcriptome during the response to drought.

Indexed as

ArabidopsisArabidopsis ProteinsRNA, Long NoncodingDrought ResistanceDroughtsGene Expression Regulation, PlantHistone DeacetylasesHistonesArabidopsis ProteinsHDA9 protein, ArabidopsisHistone DeacetylasesHistonesRNA, Long NoncodingDrought ResponseHistone DeacetylationLong Noncoding RNARNA-Binding Protein

Identifiers

PMID38177920
PMCPMC10897447
OpenAlexW4390496895

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.