Evidence mapPaperPMID 38195585Full record

ArticleNature communications2024

Integrative single-cell characterization of a frugivorous and an insectivorous bat kidney and pancreas.

Wei E Gordon, Seungbyn Baek, Hai P Nguyen, Yien-Ming Kuo, Rachael Bradley, Sarah L Fong, Nayeon Kim, Alex Galazyuk, Insuk Lee, Melissa R Ingala and 6 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 10 institutions in 2 countries.

Wei E Gordon *Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, 94158, USA.ORCID 0000-0002-2658-9680
Seungbyn Baek *Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, 03722, Republic of Korea.ORCID 0000-0002-4039-277X
Hai P NguyenDepartment of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, 94158, USA.
Yien-Ming KuoDepartment of Ophthalmology, University of California, San Francisco, San Francisco, CA, 94143, USA.
Rachael BradleyDepartment of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, 94158, USA.
Sarah L FongDepartment of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, 94158, USA.ORCID 0000-0003-0900-5505
Nayeon KimDepartment of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, 03722, Republic of Korea.
Alex GalazyukHearing Research Focus Area, Department of Anatomy and Neurobiology, Northeast Ohio Medical University, Rootstown, OH, USA.ORCID 0000-0003-2765-9430
Insuk LeeDepartment of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul, 03722, Republic of Korea.ORCID 0000-0003-3146-6180
Melissa R IngalaDepartment of Biological Sciences, Fairleigh Dickinson University, Madison, NJ, 07940, USA.
Nancy B SimmonsDivision of Vertebrate Zoology, Department of Mammalogy, American Museum of Natural History, New York, NY, 10024, USA.ORCID 0000-0001-8807-7499
Tony SchountzDepartment of Microbiology, Immunology, and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, CO, 80523, USA.ORCID 0000-0002-1292-7650
Lisa Noelle CooperMusculoskeletal Research Focus Area, Department of Anatomy and Neurobiology, Northeast Ohio Medical University, Rootstown, OH, 44272, USA.ORCID 0000-0002-1765-927X
Ilias Georgakopoulos-SoaresInstitute for Personalized Medicine, Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, 17033, USA.ORCID 0000-0003-3641-1488
Martin HembergGene Lay Institute of Immunology and Inflammation, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, 02115, USA. mhemberg@bwh.harvard.edu.ORCID 0000-0001-8895-5239
Nadav AhituvDepartment of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, 94158, USA. nadav.ahituv@ucsf.edu.ORCID 0000-0002-7434-8144
University of California, San Francisco · USNortheast Ohio Medical University · USYonsei University · KRAmerican Museum of Natural History · USBrigham and Women's Hospital · USColorado State University · USFairleigh Dickinson University · USMenlo College · USPennsylvania State University · USPohang University of Science and Technology · KR

Funding

P30-CORE GRANT FOR VISION RESEARCHP30EY002162 · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · 1985 to 2005
$3.2M
Auditory Information Processing in the MidbrainR01DC000937 · NORTHEAST OHIO MEDICAL UNIVERSITY · 1996 to 2025
$2.1M
EDGE CMT: Genomic characterization of mammalian adaptation to frugivoryR01HG012396 · NHGRI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · 2023 to 2025
$1.3M
Betacoronaviruses: activation and antagonism of host innate immune responsesR01AI140442 · UNIVERSITY OF PENNSYLVANIA · 2025 to 2025
$551k
Biology and infection of bats with novel bat influenza virusesR01AI134768 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI Wenjun Ma · 2022 to 2022
$406k
NEI NIH HHS P30 EY002162NHGRI NIH HHS R01 HG012396NIAID NIH HHS R01 AI134768NIAID NIH HHS R01 AI140442NIDCD NIH HHS R01 DC000937NIH HHS S10 OD017993
6 · The paper itself

Abstract

Frugivory evolved multiple times in mammals, including bats. However, the cellular and molecular components driving it remain largely unknown. Here, we use integrative single-cell sequencing (scRNA-seq and scATAC-seq) on insectivorous (Eptesicus fuscus; big brown bat) and frugivorous (Artibeus jamaicensis; Jamaican fruit bat) bat kidneys and pancreases and identify key cell population, gene expression and regulatory differences associated with the Jamaican fruit bat that also relate to human disease, particularly diabetes. We find a decrease in loop of Henle and an increase in collecting duct cells, and differentially active genes and regulatory elements involved in fluid and electrolyte balance in the Jamaican fruit bat kidney. The Jamaican fruit bat pancreas shows an increase in endocrine and a decrease in exocrine cells, and differences in genes and regulatory elements involved in insulin regulation. We also find that these frugivorous bats share several molecular characteristics with human diabetes. Combined, our work provides insights from a frugivorous mammal that could be leveraged for therapeutic purposes.

Indexed as

ChiropteraDiabetes MellitusAnimalsEpithelial CellsHumansKidneyPancreas

Identifiers

PMID38195585
PMCPMC10776631
OpenAlexW4390727336

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.