Evidence map›Paper›PMID 38212624›Full record

ArticleNature communications2024

Disordered-to-ordered transitions in assembly factors allow the complex II catalytic subunit to switch binding partners.

Pankaj Sharma, Elena Maklashina, Markus Voehler, Sona Balintova, Sarka Dvorakova, Michal Kraus, Katerina Hadrava Vanova, Zuzana Nahacka, Renata Zobalova, Stepana Boukalova and 8 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Pankaj SharmaDepartment of Pharmacology, Vanderbilt University, Nashville, TN, 37232, USA.ORCID 0000-0002-7053-1574
Elena MaklashinaMolecular Biology Division, San Francisco VA Health Care System, San Francisco, CA, 94121, USA.
Markus VoehlerDepartment of Chemistry Vanderbilt University, Nashville, TN, 37232, USA.ORCID 0000-0002-9509-6396
Sona BalintovaInstitute of Biotechnology, Czech Academy of Sciences, 252 50, Prague-West, Czech Republic.
Sarka DvorakovaInstitute of Biotechnology, Czech Academy of Sciences, 252 50, Prague-West, Czech Republic.
Michal KrausInstitute of Biotechnology, Czech Academy of Sciences, 252 50, Prague-West, Czech Republic.
Katerina Hadrava VanovaInstitute of Biotechnology, Czech Academy of Sciences, 252 50, Prague-West, Czech Republic.ORCID 0000-0002-8868-6013
Zuzana NahackaInstitute of Biotechnology, Czech Academy of Sciences, 252 50, Prague-West, Czech Republic.
Renata ZobalovaInstitute of Biotechnology, Czech Academy of Sciences, 252 50, Prague-West, Czech Republic.
Stepana BoukalovaInstitute of Biotechnology, Czech Academy of Sciences, 252 50, Prague-West, Czech Republic.ORCID 0000-0002-6478-4604
Kristyna CunatovaInstitute of Physiology, Czech Academy of Sciences, Prague 4, 142 20, Prague, Czech Republic.ORCID 0000-0001-9993-2040
Tomas MracekInstitute of Physiology, Czech Academy of Sciences, Prague 4, 142 20, Prague, Czech Republic.ORCID 0000-0002-9492-0718
Hans K GhayeeDepartment of Medicine, Division of Endocrinology & Metabolism, University of Florida College of Medicine and Malcom Randall, VA Medical Center, Gainesville, FL, 32608, USA.
Karel PacakEunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, 20814, USA.ORCID 0000-0002-3541-3767
Jakub RohlenaInstitute of Biotechnology, Czech Academy of Sciences, 252 50, Prague-West, Czech Republic.ORCID 0000-0001-5427-6502
Jiri NeuzilInstitute of Biotechnology, Czech Academy of Sciences, 252 50, Prague-West, Czech Republic. j.neuzil@griffith.edu.au.ORCID 0000-0002-2478-2460
Gary CecchiniMolecular Biology Division, San Francisco VA Health Care System, San Francisco, CA, 94121, USA. Gary.Cecchini@ucsf.edu.ORCID 0000-0002-0571-1747
T M IversonDepartment of Pharmacology, Vanderbilt University, Nashville, TN, 37232, USA. tina.iverson@vanderbilt.edu.ORCID 0000-0001-8816-6352

Funding

Structure/Function of Complex ll OxidoreductasesR01GM061606 · NIGMS · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI CECCHINI, GARY, IVERSON, T M · 2001 to 2022
$9.1M
Structural Biology of Multi-Domain Proteins and Multi-Protein Machinery in DNA Replication and RepairR35GM118089 · NIGMS · VANDERBILT UNIVERSITY · PI WALTER J. CHAZIN · 2016 to 2026
$4.9M
Console upgrades for biological NMR spectrometersS10RR025677 · NCRR · VANDERBILT UNIVERSITY · PI SANDERS, CHARLES R · 2009 to 2009
$460k
BLR&D Research Career Scientist Award ApplicationIK6BX004215 · VA · VETERANS AFFAIRS MED CTR SAN FRANCISCO · PI CECCHINI, GARY · 2018 to 2024
–
BLRD VA IK6 BX004215NCRR NIH HHS S10 RR025677NIGMS NIH HHS R01 GM061606NIGMS NIH HHS R35 GM118089
6 · The paper itself

Abstract

Complex II (CII) activity controls phenomena that require crosstalk between metabolism and signaling, including neurodegeneration, cancer metabolism, immune activation, and ischemia-reperfusion injury. CII activity can be regulated at the level of assembly, a process that leverages metastable assembly intermediates. The nature of these intermediates and how CII subunits transfer between metastable complexes remains unclear. In this work, we identify metastable species containing the SDHA subunit and its assembly factors, and we assign a preferred temporal sequence of appearance of these species during CII assembly. Structures of two species show that the assembly factors undergo disordered-to-ordered transitions without the appearance of significant secondary structure. The findings identify that intrinsically disordered regions are critical in regulating CII assembly, an observation that has implications for the control of assembly in other biomolecular complexes.

Indexed as

Catalytic DomainProtein Structure, Secondary

Identifiers

PMID38212624
PMCPMC10784507

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.