Evidence map›Paper›PMID 38238488›Full record

ArticleScientific reports2024

New marker for chronic kidney disease progression and mortality in medical-word virtual space.

Eiichiro Kanda, Bogdan I Epureanu, Taiji Adachi, Tamaki Sasaki, Naoki Kashihara

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Eiichiro KandaMedical Science, Kawasaki Medical School, Kurashiki, Okayama, Japan. kms.cds.kanda@gmail.com.
Bogdan I EpureanuCollege of Engineering, University of Michigan, Ann Arbor, MI, USA.
Taiji AdachiInstitute for Life and Medical Sciences, Kyoto University, Sakyo, Kyoto, Japan.
Tamaki SasakiDepartment of Nephrology and Hypertension, Kawasaki Medical School, Kurashiki, Okayama, Japan.
Naoki KashiharaKawasaki Geriatric Medical Center, Okayama, Japan.

Funding

Kawasaki Medical School Research Project R05B005The Japan Society for the Promotion of Science KAKENHI JP 22K08346
6 · The paper itself

Abstract

A new marker reflecting the pathophysiology of chronic kidney disease (CKD) has been desired for its therapy. In this study, we developed a virtual space where data in medical words and those of actual CKD patients were unified by natural language processing and category theory. A virtual space of medical words was constructed from the CKD-related literature (n = 165,271) using Word2Vec, in which 106,612 words composed a network. The network satisfied vector calculations, and retained the meanings of medical words. The data of CKD patients of a cohort study for 3 years (n = 26,433) were transformed into the network as medical-word vectors. We let the relationship between vectors of patient data and the outcome (dialysis or death) be a marker (inner product). Then, the inner product accurately predicted the outcomes: C-statistics of 0.911 (95% CI 0.897, 0.924). Cox proportional hazards models showed that the risk of the outcomes in the high-inner-product group was 21.92 (95% CI 14.77, 32.51) times higher than that in the low-inner-product group. This study showed that CKD patients can be treated as a network of medical words that reflect the pathophysiological condition of CKD and the risks of CKD progression and mortality.

Indexed as

Renal DialysisRenal Insufficiency, ChronicCohort StudiesDisease ProgressionHumansProportional Hazards Models

Identifiers

PMID38238488
PMCPMC10796328

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.