Evidence map›Paper›PMID 38245532›Full record

ArticleNature communications2024

Proteomic analysis of SARS-CoV-2 particles unveils a key role of G3BP proteins in viral assembly.

Emilie Murigneux, Laurent Softic, Corentin Aubé, Carmen Grandi, Delphine Judith, Johanna Bruce, Morgane Le Gall, François Guillonneau, Alain Schmitt, Vincent Parissi and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
12.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 2 countries.

Emilie Murigneux *Université Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.
Laurent Softic *Université Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.
Corentin Aubé *Université Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.
Carmen GrandiInstitute for Molecules and Materials, Radboud University, 6525, AJ, Nijmegen, the Netherlands.ORCID 0000-0003-1323-4140
Delphine JudithUniversité Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.
Johanna BruceProteom'IC facility, Université Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.ORCID 0000-0002-1522-9604
Morgane Le GallProteom'IC facility, Université Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.ORCID 0000-0002-4935-7065
François GuillonneauProteom'IC facility, Université Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.ORCID 0000-0003-1484-4696
Alain SchmittUniversité Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.ORCID 0000-0002-8011-2277
Vincent ParissiMicrobiologie Fondamentale et Pathogénicité Laboratory (MFP), UMR 5234, « Mobility of pathogenic genomes and chromatin dynamics » team (MobilVIR), CNRS-University of Bordeaux, DyNAVIR network, Bordeaux, France.ORCID 0000-0003-1661-7841
Clarisse Berlioz-TorrentUniversité Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France.
Laurent MeertensUniversité Paris Cité, Inserm U944, CNRS 7212, Institut de Recherche Saint-Louis, Hôpital Saint-Louis, Paris, France.
Maike M K HansenInstitute for Molecules and Materials, Radboud University, 6525, AJ, Nijmegen, the Netherlands.ORCID 0000-0001-7998-6631
Sarah Gallois-MontbrunUniversité Paris Cité, CNRS, Inserm, Institut Cochin, F-75014, Paris, France. sarah.gallois-montbrun@inserm.fr.ORCID 0000-0002-7870-1814
Centre National de la Recherche Scientifique · FRRadboud University Nijmegen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Considerable progress has been made in understanding the molecular host-virus battlefield during SARS-CoV-2 infection. Nevertheless, the assembly and egress of newly formed virions are less understood. To identify host proteins involved in viral morphogenesis, we characterize the proteome of SARS-CoV-2 virions produced from A549-ACE2 and Calu-3 cells, isolated via ultracentrifugation on sucrose cushion or by ACE-2 affinity capture. Bioinformatic analysis unveils 92 SARS-CoV-2 virion-associated host factors, providing a valuable resource to better understand the molecular environment of virion production. We reveal that G3BP1 and G3BP2 (G3BP1/2), two major stress granule nucleators, are embedded within virions and unexpectedly favor virion production. Furthermore, we show that G3BP1/2 participate in the formation of cytoplasmic membrane vesicles, that are likely virion assembly sites, consistent with a proviral role of G3BP1/2 in SARS-CoV-2 dissemination. Altogether, these findings provide new insights into host factors required for SARS-CoV-2 assembly with potential implications for future therapeutic targeting.

Indexed as

COVID-19SARS-CoV-2DNA HelicasesHumansPoly-ADP-Ribose Binding ProteinsProteomicsRNA HelicasesRNA Recognition Motif ProteinsVirionVirus AssemblyVirus ReplicationDNA HelicasesG3BP1 protein, humanPoly-ADP-Ribose Binding ProteinsRNA HelicasesRNA Recognition Motif Proteins

Identifiers

PMID38245532
PMCPMC10799903
OpenAlexW4391046229

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.