Evidence map›Paper›PMID 38263080›Full record

ArticleBMC research notes2024

Wisconsin diversity panel phenotypes: spoken descriptions of plants and supporting data.

Colleen F Yanarella, Leila Fattel, Ásrún Ý Kristmundsdóttir, Miriam D Lopez, Jode W Edwards, Darwin A Campbell, Craig A Abel, Carolyn J Lawrence-Dill

Abstract read
In one paragraph

Article in BMC research notes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Colleen F YanarellaIowa State University, 50011, Ames, IA, USA.
Leila FattelIowa State University, 50011, Ames, IA, USA.
Ásrún Ý KristmundsdóttirIowa State University, 50011, Ames, IA, USA.
Miriam D LopezUSDA ARS, 50011, Ames, IA, USA.
Jode W EdwardsUSDA ARS, 50011, Ames, IA, USA.
Darwin A CampbellIowa State University, 50011, Ames, IA, USA.
Craig A AbelUSDA ARS, 50011, Ames, IA, USA.
Carolyn J Lawrence-DillIowa State University, 50011, Ames, IA, USA. triffid@iastate.edu.

Funding

Iowa Agriculture and Home Economics Experiment Station IOW04714National Science Foundation DGE-1545453National Science Foundation and US Department of Agriculture 2021-67021-35329USDA ARS 5030-21000-019-000DUSDA ARS 5030-21000-066-000D
6 · The paper itself

Abstract

objectivesPhenotyping plants in a field environment can involve a variety of methods including the use of automated instruments and labor-intensive manual measurement and scoring. Researchers also collect language-based phenotypic descriptions and use controlled vocabularies and structures such as ontologies to enable computation on descriptive phenotype data, including methods to determine phenotypic similarities. In this study, spoken descriptions of plants were collected and observers were instructed to use their own vocabulary to describe plant features that were present and visible. Further, these plants were measured and scored manually as part of a larger study to investigate whether spoken plant descriptions can be used to recover known biological phenomena. DATA DESCRIPTION: Data comprise phenotypic observations of 686 accessions of the maize Wisconsin Diversity panel, and 25 positive control accessions that carry visible, dramatic phenotypes. The data include the list of accessions planted, field layout, data collection procedures, student participants' (whose personal data are protected for ethical reasons) and volunteers' observation transcripts, volunteers' audio data files, terrestrial and aerial images of the plants, Amazon Web Services method selection experimental data, and manually collected phenotypes (e.g., plant height, ear and tassel features, etc.; measurements and scores). Data were collected during the summer of 2021 at Iowa State University's Agricultural Engineering and Agronomy Research Farms.

Indexed as

AgricultureData CollectionFarmsHumansPhenotypeWisconsinAssociation studiesAudio recordingsImagesMaizePhenotypingText transcriptsWisconsin Diversity panel

Identifiers

PMID38263080
PMCPMC10807131

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.