Evidence map›Paper›PMID 38267421›Full record

ArticleNature communications2024

Emergence of periodic circumferential actin cables from the anisotropic fusion of actin nanoclusters during tubulogenesis.

Sayaka Sekine, Mitsusuke Tarama, Housei Wada, Mustafa M Sami, Tatsuo Shibata, Shigeo Hayashi

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.6field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. High-speed in situ tomographic imaging at lab scale.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Sayaka Sekine *Laboratory for Morphogenetic Signaling, RIKEN Center for Biosystems Dynamics Research, Kobe, Japan. sayaka.sekine.d7@tohoku.ac.jp.ORCID 0000-0001-5656-2959
Mitsusuke Tarama *Laboratory for Physical Biology, RIKEN Center for Biosystems Dynamics Research, Kobe, Japan. tarama.mitsusuke@phys.kyushu-u.ac.jp.ORCID 0000-0002-2708-1774
Housei WadaLaboratory for Morphogenetic Signaling, RIKEN Center for Biosystems Dynamics Research, Kobe, Japan.
Mustafa M SamiLaboratory for Morphogenetic Signaling, RIKEN Center for Biosystems Dynamics Research, Kobe, Japan.
Tatsuo ShibataLaboratory for Physical Biology, RIKEN Center for Biosystems Dynamics Research, Kobe, Japan.ORCID 0000-0002-9294-9998
Shigeo HayashiLaboratory for Morphogenetic Signaling, RIKEN Center for Biosystems Dynamics Research, Kobe, Japan.
RIKEN Center for Biosystems Dynamics Research · JPKyushu University · JPOkinawa Institute of Science and Technology Graduate University · JPTohoku University · JP

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) 18J40165MEXT | Japan Society for the Promotion of Science (JSPS) 18K14746MEXT | Japan Society for the Promotion of Science (JSPS) 19H00996MEXT | Japan Society for the Promotion of Science (JSPS) 22H05170MEXT | Japan Society for the Promotion of Science (JSPS) 22K06214MEXT | Japan Society for the Promotion of Science (JSPS) 22K14017
6 · The paper itself

Abstract

The periodic circumferential cytoskeleton supports various tubular tissues. Radial expansion of the tube lumen causes anisotropic tensile stress, which can be exploited as a geometric cue. However, the molecular machinery linking anisotropy to robust circumferential patterning is poorly understood. Here, we aim to reveal the emergent process of circumferential actin cable formation in a Drosophila tracheal tube. During luminal expansion, sporadic actin nanoclusters emerge and exhibit circumferentially biased motion and fusion. RNAi screening reveals the formin family protein, DAAM, as an essential component responding to tissue anisotropy, and non-muscle myosin II as a component required for nanocluster fusion. An agent-based model simulation suggests that crosslinkers play a crucial role in nanocluster formation and cluster-to-cable transition occurs in response to mechanical anisotropy. Altogether, we propose that an actin nanocluster is an organizational unit that responds to stress in the cortical membrane and builds a higher-order cable structure.

Indexed as

ActinsDrosophila ProteinsAdaptor Proteins, Signal TransducingAnimalsAnisotropyComputer SimulationCytoskeletonDrosophilaMargins of ExcisionActinsAdaptor Proteins, Signal TransducingDAAM protein, DrosophilaDrosophila Proteins

Identifiers

PMID38267421
PMCPMC10808230
OpenAlexW4391233116

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.