Evidence map›Paper›PMID 38308693›Full record

ArticleActa neuropathologica2024

Cryptic exon inclusion is a molecular signature of LATE-NC in aging brains.

Mingee Chung, E Kathleen Carter, Austin M Veire, Eric B Dammer, Jianjun Chang, Duc M Duong, Nisha Raj, Gary J Bassell, Jonathan D Glass, Tania F Gendron and 4 more

Abstract read
In one paragraph

Article in Acta neuropathologica, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. TDP-43: [GU]-ardian of the transcriptome.Molecular neurodegeneration · 2026
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
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  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Mingee ChungDepartment of Cell Biology, Emory University, Atlanta, GA, 30322, USA.
E Kathleen CarterDepartment of Biochemistry, Emory University, Atlanta, GA, 30322, USA.
Austin M VeireDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.
Eric B DammerDepartment of Biochemistry, Emory University, Atlanta, GA, 30322, USA.
Jianjun ChangDepartment of Cell Biology, Emory University, Atlanta, GA, 30322, USA.
Duc M DuongDepartment of Biochemistry, Emory University, Atlanta, GA, 30322, USA.
Nisha RajDepartment of Cell Biology, Emory University, Atlanta, GA, 30322, USA.
Gary J BassellDepartment of Cell Biology, Emory University, Atlanta, GA, 30322, USA.
Jonathan D GlassCenter for Neurodegenerative Diseases, Emory University, Atlanta, GA, 30322, USA.
Tania F GendronDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.
Peter T NelsonDepartment of Pathology and Sanders-Brown Center On Aging, University of Kentucky, Lexington, KY, 40536, USA.
Allan I LeveyCenter for Neurodegenerative Diseases, Emory University, Atlanta, GA, 30322, USA. alevey@emory.edu.
Nicholas T SeyfriedDepartment of Biochemistry, Emory University, Atlanta, GA, 30322, USA. nseyfri@emory.edu.
Zachary T McEachinDepartment of Cell Biology, Emory University, Atlanta, GA, 30322, USA. zmceach@emory.edu.ORCID 0000-0002-2369-8726

Funding

The Goizueta Alzheimer's Disease Research CenterP30AG066511 · NIA · EMORY UNIVERSITY · PI ALLAN I LEVEY · 2020 to 2026
$29.0M
University of Kentucky Alzheimer's Disease Research CenterP30AG072946 · NIA · UNIVERSITY OF KENTUCKY · PI LINDA J VAN ELDIK · 2021 to 2026
$23.5M
Project 3: Neuropathology of the multi-proteinopathy of c9FTD/ALS.P01NS084974 · NINDS · MAYO CLINIC JACKSONVILLE · PI PETRUCELLI, LEONARD · 2014 to 2024
$17.6M
Supplement to AMP-AD Brain Proteomic Network Enhancement, Validation and Translation into CSF BiomarkersU01AG061357 · NIA · EMORY UNIVERSITY · PI LEVEY, ALLAN I, SEYFRIED, NICHOLAS THOMAS · 2018 to 2022
$9.1M
NIA NIH HHS P30 AG066511NIA NIH HHS P30 AG072946NIA NIH HHS U01 AG061357NINDS NIH HHS 5P01NS084974-07NINDS NIH HHS P01 NS084974
6 · The paper itself

Abstract

The aggregation, mislocalization, and phosphorylation of TDP-43 are pathologic hallmarks of several neurodegenerative diseases and provide a defining criterion for the neuropathologic diagnosis of Limbic-predominant Age-related TDP-43 Encephalopathy (LATE). LATE neuropathologic changes (LATE-NC) are often comorbid with other neurodegenerative pathologies including Alzheimer's disease neuropathologic changes (ADNC). We examined whether TDP-43 regulated cryptic exons accumulate in the hippocampus of neuropathologically confirmed LATE-NC cases. We found that several cryptic RNAs are robustly expressed in LATE-NC cases with or without comorbid ADNC and correlate with pTDP-43 abundance; however, the accumulation of cryptic RNAs is more robust in LATE-NC with comorbid ADNC. Additionally, cryptic RNAs can robustly distinguish LATE-NC from healthy controls and AD cases. These findings expand our current understanding and provide novel potential biomarkers for LATE pathogenesis.

Indexed as

Alzheimer DiseaseDementiaTDP-43 ProteinopathiesAgingBrainDNA-Binding ProteinsExonsHumansDNA-Binding ProteinsAlzheimer’s diseaseCryptic exonsLATE-NCTDP-43

Identifiers

PMID38308693
PMCPMC10838224

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.