Evidence mapPaperPMID 38328583Full record

ArticleFrontiers in microbiology2023

Comparative genomic analysis of uropathogenic

Marco A Flores-Oropeza, Sara A Ochoa, Ariadnna Cruz-Córdova, Rolando Chavez-Tepecano, Eva Martínez-Peñafiel, Daniel Rembao-Bojórquez, Sergio Zavala-Vega, Rigoberto Hernández-Castro, Marcos Flores-Encarnacion, José Arellano-Galindo and 2 more

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. UropathogenicMicroorganisms · 2025
    Article
  6. No Genomic Signatures Were Found inVeterinary sciences · 2025
    Article
  7. Review
  8. Molecular Analysis ofMicroorganisms · 2024
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Marco A Flores-OropezaPosgrado en Ciencias Biomédicas, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Mexico City, Mexico.
Sara A OchoaLaboratorio de Investigación en Bacteriología Intestinal, Unidad de Enfermedades Infecciosas, Hospital Infantil de México Federico Gómez, Mexico City, Mexico.
Ariadnna Cruz-CórdovaLaboratorio de Investigación en Bacteriología Intestinal, Unidad de Enfermedades Infecciosas, Hospital Infantil de México Federico Gómez, Mexico City, Mexico.
Rolando Chavez-TepecanoGinecología del Hospital Militar Regional Especialidades de Monterrey, Monterrey, Mexico.
Eva Martínez-PeñafielLaboratorio de Investigación en Bacteriología Intestinal, Unidad de Enfermedades Infecciosas, Hospital Infantil de México Federico Gómez, Mexico City, Mexico.
Daniel Rembao-BojórquezDepartamento de Patología, Instituto Nacional de Neurología y Neurocirugía, Manuel Velasco Suárez, Mexico City, Mexico.
Sergio Zavala-VegaDepartamento de Patología, Instituto Nacional de Neurología y Neurocirugía, Manuel Velasco Suárez, Mexico City, Mexico.
Rigoberto Hernández-CastroDepartmento de Ecología de Agentes Patógenos, Hospital General "Dr. Manuel Gea González", Mexico City, Mexico.
Marcos Flores-EncarnacionLaboratorio de Microbiología Molecular y Celular, Biomedicina, Facultad de Medicina, BUAP, Puebla, Mexico.
José Arellano-GalindoLaboratorio de Virología Clínica y Experimental, Unidad de Investigación en Enfermedades Infecciosas, Hospital Infantil de México Federico Gómez, Mexico City, Mexico.
Daniel VélezHospital Militar de Especialidades de la Mujer y Neonatología, Mexico City, Mexico.
Juan Xicohtencatl-CortesLaboratorio de Investigación en Bacteriología Intestinal, Unidad de Enfermedades Infecciosas, Hospital Infantil de México Federico Gómez, Mexico City, Mexico.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Recurrent urinary tract infections (RUTIs) caused by uropathogenic Aim: In this work, a comparative genomics analysis of three clinical RUTI strains isolated from bladder biopsy specimens was performed. Materials and methods: One hundred seventy-two whole genomes of urinary tract Results: The UTI-1_774U and UTI-3_455U/ST1193 strains were associated with the extraintestinal pathotypes, and the UTI-2_245U/ST295 strain was associated with the intestinal pathotype, according to a phylogenetic analysis of 172 Conclusion: The high variability and genetic diversity of the RUTI strains indicate that are a mosaic of virulence, resistance, and fitness genes that could promote recurrence in susceptible patients.

Indexed as

adherenceMDRRUTIsUPECWGS

Identifiers

PMID38328583
PMCPMC10848155

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.