Evidence map›Paper›PMID 38331743›Full record

ArticleBMC plant biology2024

Generation and characterisation of an Arabidopsis thaliana f3h/fls1/ans triple mutant that accumulates eriodictyol derivatives.

Hanna Marie Schilbert, Mareike Busche, Vania Sáez, Andrea Angeli, Bernd Weisshaar, Stefan Martens, Ralf Stracke

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Hanna Marie Schilbert *Faculty of Biology, Genetics and Genomics of Plants, Bielefeld University, 33615, Bielefeld, Germany.ORCID http://orcid.org/0000-0003-0474-7753
Mareike Busche *Faculty of Biology, Genetics and Genomics of Plants, Bielefeld University, 33615, Bielefeld, Germany.ORCID http://orcid.org/0000-0002-2114-7613
Vania SáezResearch and Innovation Centre, Fondazione Edmund Mach, 38098, San Michele all'Adige (TN), Italy.ORCID http://orcid.org/0000-0002-6477-6671
Andrea AngeliResearch and Innovation Centre, Fondazione Edmund Mach, 38098, San Michele all'Adige (TN), Italy.ORCID http://orcid.org/0009-0003-8882-5858
Bernd WeisshaarFaculty of Biology, Genetics and Genomics of Plants, Bielefeld University, 33615, Bielefeld, Germany.ORCID http://orcid.org/0000-0002-7635-3473
Stefan MartensResearch and Innovation Centre, Fondazione Edmund Mach, 38098, San Michele all'Adige (TN), Italy.ORCID http://orcid.org/0000-0001-9913-4882
Ralf StrackeFaculty of Biology, Genetics and Genomics of Plants, Bielefeld University, 33615, Bielefeld, Germany. ralf.stracke@uni-bielefeld.de.ORCID http://orcid.org/0000-0002-9261-2279
Bielefeld University · DEFondazione Edmund Mach · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFlavonoids are plant specialised metabolites, which derive from phenylalanine and acetate metabolism. They possess a variety of beneficial characteristics for plants and humans. Several modification steps in the synthesis of tricyclic flavonoids cause for the amazing diversity of flavonoids in plants. The 2-oxoglutarate-dependent dioxygenases (2-ODDs) flavanone 3-hydroxylase (F3H, synonym FHT), flavonol synthase (FLS) and anthocyanidin synthase (ANS, synonym leucoanthocyanidin dioxygenase (LDOX)), catalyse oxidative modifications to the central C ring. They are highly similar and have been shown to catalyse, at least in part, each other's reactions. FLS and ANS have been identified as bifunctional enzymes in many species, including Arabidopsis thaliana, stressing the capability of plants to bypass missing or mutated reaction steps on the way to flavonoid production. However, little is known about such bypass reactions and the flavonoid composition of plants lacking all three central flavonoid 2-ODDs.

resultsTo address this issue, we generated a f3h/fls1/ans mutant, as well as the corresponding double mutants and investigated the flavonoid composition of this mutant collection. The f3h/fls1/ans mutant was further characterised at the genomic level by analysis of a nanopore DNA sequencing generated genome sequence assembly and at the transcriptomic level by RNA-Seq analysis. The mutant collection established, including the novel double mutants f3h/fls1 and f3h/ans, was used to validate and analyse the multifunctionalities of F3H, FLS1, and ANS in planta. Metabolite analyses revealed the accumulation of eriodictyol and additional glycosylated derivatives in mutants carrying the f3h mutant allele, resulting from the conversion of naringenin to eriodictyol by flavonoid 3'-hydroxylase (F3'H) activity.

conclusionsWe describe the in planta multifunctionality of the three central flavonoid 2-ODDs from A. thaliana and identify a bypass in the f3h/fls1/ans triple mutant that leads to the formation of eriodictyol derivatives. As (homo-)eriodictyols are known as bitter taste maskers, the annotated eriodictyol (derivatives) and in particular the observations made on their in planta production, could provide valuable insights for the creation of novel food supplements.

Indexed as

ArabidopsisFlavanonesFlavonoidsGene Expression Regulation, PlantHumansOxidoreductasesOxygenasesPlant ProteinsPlantsanthocyanidin synthaseeriodictyolFlavanonesFlavonoidsflavonol synthaseOxidoreductasesOxygenasesPlant Proteins2-oxoglutarate-dependent dioxygenasesEnzyme promiscuityFlavonoid biosynthesisFlavonoidsMultifunctionalityTriple 2-ODD mutant

Identifiers

PMID38331743
PMCPMC10854054
OpenAlexW4391690659

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.