Evidence map›Paper›PMID 38349154›Full record

ArticlemSphere2024

Herptile gut microbiomes: a natural system to study multi-kingdom interactions between filamentous fungi and bacteria.

Lluvia Vargas-Gastélum, Alexander S Romer, Marjan Ghotbi, Jason W Dallas, N Reed Alexander, Kylie C Moe, Kerry L McPhail, George F Neuhaus, Leila Shadmani, Joseph W Spatafora and 3 more

Open access · goldAbstract read
In one paragraph

Article in mSphere, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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  6. Advancing the study of microbial symbionts of amphibians and reptiles.Frontiers in amphibian and reptile science · 2026
    Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Lluvia Vargas-Gastélum *Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, USA.ORCID 0000-0003-4393-3145
Alexander S Romer *Department of Biology, Middle Tennessee State University, Murfreesboro, Tennessee, USA.ORCID 0000-0001-7882-4622
Marjan GhotbiResearch Division 3, Marine Ecology, GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany.ORCID 0000-0003-4655-6445
Jason W DallasDepartment of Biology, Middle Tennessee State University, Murfreesboro, Tennessee, USA.ORCID 0000-0002-3159-0985
N Reed AlexanderDepartment of Biology, Middle Tennessee State University, Murfreesboro, Tennessee, USA.ORCID 0009-0004-7271-5520
Kylie C MoeDepartment of Biology, Middle Tennessee State University, Murfreesboro, Tennessee, USA.
Kerry L McPhailDepartment of Pharmaceutical Sciences, College of Pharmacy, Oregon State University, Corvallis, Oregon, USA.ORCID 0000-0003-2076-1002
George F NeuhausDepartment of Pharmaceutical Sciences, College of Pharmacy, Oregon State University, Corvallis, Oregon, USA.ORCID 0000-0003-2303-365X
Leila ShadmaniDepartment of Microbiology and Plant Pathology, University of California Riverside, Riverside, California, USA.
Joseph W SpataforaDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, USA.
Jason E StajichDepartment of Microbiology and Plant Pathology, University of California Riverside, Riverside, California, USA.ORCID 0000-0002-7591-0020
Javier F TabimaDepartment of Biology, Clark University, Worcester, Massachusetts, USA.ORCID 0000-0002-3603-2691
Donald M WalkerDepartment of Biology, Middle Tennessee State University, Murfreesboro, Tennessee, USA.ORCID 0000-0003-3119-8809
Middle Tennessee State University · USOregon State University · USUniversity of California, Riverside · USClark University · USGEOMAR Helmholtz Centre for Ocean Research Kiel · DE

Funding

National Science Foundation CAREER-2236580National Science Foundation EF-2125065, EF-2125066, EF-2125067
6 · The paper itself

Abstract

Reptiles and amphibians (herptiles) are some of the most endangered and threatened species on the planet and numerous conservation strategies are being implemented with the goal of ensuring species recovery. Little is known, however, about the gut microbiome of wild herptiles and how it relates to the health of these populations. Here, we report results from the gut microbiome characterization of both a broad survey of herptiles, and the correlation between the fungus

Indexed as

Gastrointestinal MicrobiomeMicrobiotaAnimalsBacteriaFungiRNA, Ribosomal, 16SRNA, Ribosomal, 16Samphibiananaerobic gut fungicyclic peptidemycobiomenon-ribosomal peptide synthetasesreptilespecialized metabolite

Identifiers

PMID38349154
PMCPMC10964425
OpenAlexW4391786773

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.