Evidence map›Paper›PMID 38356149›Full record

ArticleClinical genetics2024

Expanding the phenotype of PPP1R21-related neurodevelopmental disorder.

Mohammed Almannai, Dana Marafi, Maha S Zaki, Reza Maroofian, Stephanie Efthymiou, Nebal Waill Saadi, Bilal Filimban, Hormos Salimi Dafsari, Fatima Rahman, Shazia Maqbool and 13 more

Open access · greenAbstract read
In one paragraph

Article in Clinical genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 11 institutions in 8 countries.

Mohammed AlmannaiGenetics and Precision Medicine department (GPM), King Abdullah Specialized Children's Hospital (KASCH), King Abdulaziz Medical City, Ministry of National Guard Health Affairs (MNG-HA), Riyadh, Saudi Arabia.
Dana MarafiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.ORCID 0000-0003-2233-3423
Maha S ZakiClinical Genetics Department, Human Genetics and Genome Research Institute, National Research Centre, Cairo, Egypt.ORCID 0000-0001-7840-0002
Reza MaroofianDepartment of Neuromuscular disorders, UCL Queen Square Institute of Neurology, University College London, London, UK.
Stephanie EfthymiouDepartment of Neuromuscular disorders, UCL Queen Square Institute of Neurology, University College London, London, UK.
Nebal Waill SaadiCollege of Medicine, University of Baghdad, Pediatric Neurology, Children Welfare Teaching Hospital, Baghdad, Iraq.
Bilal FilimbanSection of Medical Genetics, Children's Hospital, King Fahad Medical City, Riyadh, Saudi Arabia.
Hormos Salimi DafsariDepartment of Pediatrics, Center for Rare Diseases, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany.
Fatima RahmanDepartment of Developmental - Behavioral Pediatrics, University of Child Health Sciences & The Children's Hospital, Lahore, Pakistan.
Shazia MaqboolDepartment of Developmental - Behavioral Pediatrics, University of Child Health Sciences & The Children's Hospital, Lahore, Pakistan.
Eissa FaqeihSection of Medical Genetics, Children's Hospital, King Fahad Medical City, Riyadh, Saudi Arabia.
Fuad Al MutairiGenetics and Precision Medicine department (GPM), King Abdullah Specialized Children's Hospital (KASCH), King Abdulaziz Medical City, Ministry of National Guard Health Affairs (MNG-HA), Riyadh, Saudi Arabia.
Hind AlsharhanDepartment of Pediatrics, College of Medicine, Kuwait University, Safat, Kuwait.
Omar AbdelatyDepartment of Pediatrics, Farwaniya Hospital, Ministry of Health, Sabah Al-Nasser, Kuwait.
Saadoun Bin-HasanDepartment of Pediatrics, Farwaniya Hospital, Ministry of Health, Sabah Al-Nasser, Kuwait.
Ruizhi DuanDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Mahmoud M NoureldeenDepartment of Pediatrics, Faculty of Medicine, Beni-Suef University, Beni-Suef, Egypt.ORCID 0000-0003-2289-8950
Alaa AlqattanDepartment of Pediatrics, Farwaniya Hospital, Ministry of Health, Sabah Al-Nasser, Kuwait.
Henry HouldenDepartment of Neuromuscular disorders, UCL Queen Square Institute of Neurology, University College London, London, UK.
Jill V HunterTexas Children Hospital, Houston, Texas, USA.
Jennifer E PoseyDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
James R LupskiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA.
Ayman W El-HattabDepartment of Clinical Sciences, College of Medicine, University of Sharjah, Sharjah, United Arab Emirates.ORCID 0000-0002-5737-5271
Baylor College of Medicine · USFarwaniya Hospital · KWQueen Mary University of London · GBKing Abdulaziz Medical City · SAKing Fahd Medical City · SAArmed Forces College of Medicine · EGBeni-Suef University · EGJohns Hopkins University · USUniversity of Baghdad · IQUniversity of Cologne · DEUniversity of Sharjah · AE

Funding

Baylor-Johns Hopkins Center for Mendelian GeneticsUM1HG006542 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2016 to 2020
$14.5M
Frequency of variants of unknown significance by ancestry groups in the All of Us Research Program cohortU01HG011758 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI RICHARD A GIBBS, JAMES R. LUPSKI · 2021 to 2026
$13.8M
MEDICAL GENETICS RESEARCH FELLOWSHIP PROGRAMT32GM007526 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI Brendan Lee · 1985 to 2026
$11.4M
STRUCTURAL VARIATION IN NEUROLOGICAL DISEASER35NS105078 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI LUPSKI, JAMES R. · 2018 to 2025
$6.0M
MUTATIONAL SIGNATURE(S) OF HUMAN GENOMIC REARRANGEMENT MECHANISMSR01GM106373 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI HASTINGS, PHILIP JOHN, LUPSKI, JAMES R. · 2014 to 2022
$3.1M
Individual genomic analyses to discover the molecular basis and mechanisms contributing to adult-onset diseaseK08HG008986 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI POSEY, JENNIFER ELLEN · 2017 to 2021
$831k
NHGRI NIH HHS K08 HG008986NHGRI NIH HHS U01 HG011758NHGRI NIH HHS UM1 HG006542NIGMS NIH HHS R01 GM106373NIGMS NIH HHS T32 GM007526NINDS NIH HHS R35 NS105078Wellcome TrustWellcome Trust WT093205MAWellcome Trust WT104033AIA
6 · The paper itself

Abstract

PPP1R21 encodes for a conserved protein that is involved in endosomal maturation. Biallelic pathogenic variants in PPP1R21 have been associated with a syndromic neurodevelopmental disorder from studying 13 affected individuals. In this report, we present 11 additional individuals from nine unrelated families and their clinical, radiological, and molecular findings. We identified eight different variants in PPP1R21, of which six were novel variants. Global developmental delay and hypotonia are neurological features that were observed in all individuals. There is also a similar pattern of dysmorphic features with coarse faces as a gestalt observed in several individuals. Common findings in 75% of individuals with available brain imaging include delays in myelination, wavy outline of the bodies of the lateral ventricles, and slight prominence of the bodies of the lateral ventricles. PPP1R21-related neurodevelopmental disorder is associated with a consistent phenotype and should be considered in highly consanguineous individuals presenting with developmental delay/intellectual disability along with coarse facial features.

Indexed as

Neurodevelopmental DisordersPhenotypeAdolescentBrainChildChild, PreschoolDevelopmental DisabilitiesFemaleGenetic Association StudiesGenetic Predisposition to DiseaseHumansInfantIntellectual DisabilityMaleMutationPedigreePPP1R21 protein, humanProtein Phosphatase 1autosomal recessive (AR) traitconsanguinityneurodevelopmental disorders (NDD)PPP1R21

Identifiers

PMID38356149
PMCPMC11065596
OpenAlexW4391841692

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.