Evidence map›Paper›PMID 38360623›Full record

ArticleBMC biology2024

ADARs regulate cuticle collagen expression and promote survival to pathogen infection.

Alfa Dhakal, Chinnu Salim, Mary Skelly, Yarden Amichan, Ayelet T Lamm, Heather A Hundley

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. ADARs mediate distinct RNA editing activity and gene regulation in thebioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. ADR-2 regulates fertility and oocyte fate inbioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Alfa Dhakal *Cell, Molecular and Cancer Biology Graduate Program, Indiana University School of Medicine-Bloomington, Bloomington, IN, 47405, USA.
Chinnu Salim *Department of Biology, Indiana University, Bloomington, IN, 47405, USA.
Mary SkellyDepartment of Biology, Indiana University, Bloomington, IN, 47405, USA.
Yarden AmichanFaculty of Biology, Technion Institute of Technology, Haifa, Israel.
Ayelet T LammFaculty of Biology, Technion Institute of Technology, Haifa, Israel.
Heather A HundleyDepartment of Biology, Indiana University, Bloomington, IN, 47405, USA. hahundle@indiana.edu.ORCID 0000-0002-9106-9016
Indiana University Bloomington · USTechnion – Israel Institute of Technology · IL

Funding

National Science Foundation 1618-408National Science Foundation 191750United States - Israel Binational Science Foundation 2018738
6 · The paper itself

Abstract

backgroundIn all organisms, the innate immune system defends against pathogens through basal expression of molecules that provide critical barriers to invasion and inducible expression of effectors that combat infection. The adenosine deaminase that act on RNA (ADAR) family of RNA-binding proteins has been reported to influence innate immunity in metazoans. However, studies on the susceptibility of ADAR mutant animals to infection are largely lacking.

resultsHere, by analyzing adr-1 and adr-2 null mutants in well-established slow-killing assays, we find that both Caenorhabditis elegans ADARs are important for organismal survival to gram-negative and gram-positive bacteria, all of which are pathogenic to humans. Furthermore, our high-throughput sequencing and genetic analysis reveal that ADR-1 and ADR-2 function in the same pathway to regulate collagen expression. Consistent with this finding, our scanning electron microscopy studies indicate adr-1;adr-2 mutant animals also have altered cuticle morphology prior to pathogen exposure.

conclusionsOur data uncover a critical role of the C. elegans ADAR family of RNA-binding proteins in promoting cuticular collagen expression, which represents a new post-transcriptional regulatory node that influences the extracellular matrix. In addition, we provide the first evidence that ADAR mutant animals have altered susceptibility to infection with several opportunistic human pathogens, suggesting a broader role of ADARs in altering physical barriers to infection to influence innate immunity.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAdenosine DeaminaseAnimalsCollagenHumansRNA-Binding ProteinsRNA EditingAdenosine DeaminaseCaenorhabditis elegans ProteinsCollagenRNA-Binding ProteinsC. elegansDouble-stranded RNA (dsRNA)Innate immunityP. aeruginosaPost-transcriptional regulationRNA-binding proteinRNA editingRNA modification

Identifiers

PMID38360623
PMCPMC10870475
OpenAlexW4391880264

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.