Evidence map›Paper›PMID 38374207›Full record

ArticleExperimental & molecular medicine2024

Baf-mediated transcriptional regulation of teashirt is essential for the development of neural progenitor cell lineages.

Byung Su Ko, Myeong Hoon Han, Min Jee Kwon, Dong Gon Cha, Yuri Ji, Eun Seo Park, Min Jae Jeon, Somi Kim, Kyeongho Lee, Yoon Ha Choi and 6 more

Open access · goldAbstract read
In one paragraph

Article in Experimental & molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

Byung Su Ko *Department of Brain Sciences, DGIST, Daegu, 42988, Republic of Korea.
Myeong Hoon Han *Department of Brain Sciences, DGIST, Daegu, 42988, Republic of Korea.
Min Jee Kwon *Department of Brain Sciences, DGIST, Daegu, 42988, Republic of Korea.
Dong Gon Cha *Department of New Biology, DGIST, Daegu, 42988, Republic of Korea.ORCID 0000-0001-7030-2838
Yuri JiDepartment of Brain Sciences, DGIST, Daegu, 42988, Republic of Korea.
Eun Seo ParkDepartment of New Biology, DGIST, Daegu, 42988, Republic of Korea.ORCID 0000-0002-6790-5467
Min Jae JeonDepartment of Brain Sciences, DGIST, Daegu, 42988, Republic of Korea.
Somi KimDepartment of Life Sciences, Pohang University of Science and Technology (POSTECH), Pohang, 37673, Republic of Korea.
Kyeongho LeeDepartment of Brain Sciences, DGIST, Daegu, 42988, Republic of Korea.
Yoon Ha ChoiDepartment of New Biology, DGIST, Daegu, 42988, Republic of Korea.
Jusung LeeDepartment of New Biology, DGIST, Daegu, 42988, Republic of Korea.
Monica Torras-LlortInstitute of Molecular Biology of Barcelona, CSIC, Barcelona, Spain.
Ki-Jun YoonDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea.ORCID 0000-0003-2985-2541
Hyosang LeeDepartment of Brain Sciences, DGIST, Daegu, 42988, Republic of Korea.
Jong Kyoung KimDepartment of New Biology, DGIST, Daegu, 42988, Republic of Korea. blkimjk@postech.ac.kr.ORCID 0000-0002-0257-0547
Sung Bae LeeDepartment of Brain Sciences, DGIST, Daegu, 42988, Republic of Korea. sblee@dgist.ac.kr.ORCID 0000-0002-8980-6769
Daegu Gyeongbuk Institute of Science and Technology · KRPohang University of Science and Technology · KRInstitut de Biologia Molecular de Barcelona · ESKorea Advanced Institute of Science and Technology · KR

Funding

Korea Health Industry Development Institute (KHIDI) HU21C0027National Research Foundation of Korea (NRF) 2016M3C7A1904148National Research Foundation of Korea (NRF) 2016M3C7A1947307National Research Foundation of Korea (NRF) 2021R1A2C1003817National Research Foundation of Korea (NRF) 2021R1A6A1A10042944National Research Foundation of Korea (NRF) 2021R1A6C101A390National Research Foundation of Korea (NRF) 2022R1A4A2000703National Research Foundation of Korea (NRF) 2023R1A2C3004065
6 · The paper itself

Abstract

Accumulating evidence hints heterochromatin anchoring to the inner nuclear membrane as an upstream regulatory process of gene expression. Given that the formation of neural progenitor cell lineages and the subsequent maintenance of postmitotic neuronal cell identity critically rely on transcriptional regulation, it seems possible that the development of neuronal cells is influenced by cell type-specific and/or context-dependent programmed regulation of heterochromatin anchoring. Here, we explored this possibility by genetically disrupting the evolutionarily conserved barrier-to-autointegration factor (Baf) in the Drosophila nervous system. Through single-cell RNA sequencing, we demonstrated that Baf knockdown induces prominent transcriptomic changes, particularly in type I neuroblasts. Among the differentially expressed genes, our genetic analyses identified teashirt (tsh), a transcription factor that interacts with beta-catenin, to be closely associated with Baf knockdown-induced phenotypes that were suppressed by the overexpression of tsh or beta-catenin. We also found that Baf and tsh colocalized in a region adjacent to heterochromatin in type I NBs. Notably, the subnuclear localization pattern remained unchanged when one of these two proteins was knocked down, indicating that both proteins contribute to the anchoring of heterochromatin to the inner nuclear membrane. Overall, this study reveals that the Baf-mediated transcriptional regulation of teashirt is a novel molecular mechanism that regulates the development of neural progenitor cell lineages.

Indexed as

beta CateninNeural Stem CellsAnimalsDNA-Binding ProteinsDrosophilaDrosophila ProteinsGene Expression RegulationHeterochromatinNuclear ProteinsRepressor ProteinsThyrotropinBAF protein, Drosophilabeta CateninDNA-Binding ProteinsDrosophila ProteinsHeterochromatinNuclear ProteinsRepressor ProteinsThyrotropintsh protein, Drosophila

Identifiers

PMID38374207
PMCPMC10907700
OpenAlexW4391944321

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.