Evidence map›Paper›PMID 38388772›Full record

ArticleCommunications biology2024

Establishment and characterization of turtle liver organoids provides a potential model to decode their unique adaptations.

Christopher Zdyrski, Vojtech Gabriel, Thea B Gessler, Abigail Ralston, Itzel Sifuentes-Romero, Debosmita Kundu, Sydney Honold, Hannah Wickham, Nicholas E Topping, Dipak Kumar Sahoo and 10 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 6 institutions in 1 country.

Christopher ZdyrskiSMART Pharmacology, Department of Biomedical Sciences, Iowa State University, Ames, IA, USA. czdyrski@uga.edu.ORCID 0000-0002-7556-5298
Vojtech GabrielSMART Pharmacology, Department of Biomedical Sciences, Iowa State University, Ames, IA, USA.ORCID 0000-0003-2704-2297
Thea B GesslerDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA.ORCID 0000-0002-0701-0389
Abigail Ralston3D Health Solutions Inc., Ames, IA, USA.ORCID 0000-0002-2071-8349
Itzel Sifuentes-RomeroDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA.ORCID 0000-0001-8000-9256
Debosmita KunduDepartment of Statistics, Iowa State University, Ames, IA, USA.ORCID 0009-0007-0741-968X
Sydney HonoldSMART Pharmacology, Department of Biomedical Sciences, Iowa State University, Ames, IA, USA.
Hannah WickhamSMART Pharmacology, Department of Biomedical Sciences, Iowa State University, Ames, IA, USA.
Nicholas E ToppingDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA.ORCID 0000-0003-2261-0240
Dipak Kumar SahooDepartment of Veterinary Clinical Sciences, Iowa State University, Ames, IA, USA.ORCID 0000-0003-3748-3395
Basanta BistaDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA.ORCID 0000-0003-0816-9452
Jeffrey TamplinDepartment of Biology, University of Northern Iowa, Cedar Falls, IA, USA.ORCID 0000-0001-7870-3708
Oscar OspinaDepartment of Biostatistics and Bioinformatics, Moffitt Cancer Center, Tampa, FL, USA.
Pablo PiñeyroVeterinary Diagnostic Laboratory, Iowa State University, Ames, IA, USA.
Marco ArriagaDepartment of Human Genetics, University of Texas Rio Grande Valley, Brownsville, TX, USA.ORCID 0000-0003-3868-560X
Jacob A GalanDepartment of Human Genetics, University of Texas Rio Grande Valley, Brownsville, TX, USA.ORCID 0000-0003-3304-0474
David K MeyerholzDepartment of Pathology, University of Iowa, Iowa City, IA, USA.ORCID 0000-0003-1552-3253
Karin AllenspachSMART Pharmacology, Department of Biomedical Sciences, Iowa State University, Ames, IA, USA.
Jonathan P MochelSMART Pharmacology, Department of Biomedical Sciences, Iowa State University, Ames, IA, USA.
Nicole ValenzuelaDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA. nvalenzu@iastate.edu.ORCID 0000-0003-1148-631X
Iowa State University · USUniversity of Georgia · USThe University of Texas Rio Grande Valley · USMoffitt Cancer Center · USUniversity of Iowa · USUniversity of Northern Iowa · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Painted turtles are remarkable for their freeze tolerance and supercooling ability along with their associated resilience to hypoxia/anoxia and oxidative stress, rendering them an ideal biomedical model for hypoxia-induced injuries (including strokes), tissue cooling during surgeries, and organ cryopreservation. Yet, such research is hindered by their seasonal reproduction and slow maturation. Here we developed and characterized adult stem cell-derived turtle liver organoids (3D self-assembled in vitro structures) from painted, snapping, and spiny softshell turtles spanning ~175My of evolution, with a subset cryopreserved. This development is, to the best of our knowledge, a first for this vertebrate Order, and complements the only other non-avian reptile organoids from snake venom glands. Preliminary characterization, including morphological, transcriptomic, and proteomic analyses, revealed organoids enriched in cholangiocytes. Deriving organoids from distant turtles and life stages demonstrates that our techniques are broadly applicable to chelonians, permitting the development of functional genomic tools currently lacking in herpetological research. Such platform could potentially support studies including genome-to-phenome mapping, gene function, genome architecture, and adaptive responses to climate change, with implications for ecological, evolutionary, and biomedical research.

Indexed as

LiverOrganoidsTurtlesAnimalsGenomeHypoxiaProteomics

Identifiers

PMID38388772
PMCPMC10883927
OpenAlexW4392041691

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.