Evidence mapPaperPMID 38413748Full record

ArticleScientific reports2024

Fully automated kidney image biomarker prediction in ultrasound scans using Fast-Unet+.

Mostafa Ghelich Oghli, Seyed Morteza Bagheri, Ali Shabanzadeh, Mohammad Zare Mehrjardi, Ardavan Akhavan, Isaac Shiri, Mostafa Taghipour, Zahra Shabanzadeh

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Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mostafa Ghelich OghliResearch and Development Department, Med Fanavaran Plus Co., Karaj, Iran. m.g31_mesu@yahoo.com.
Seyed Morteza BagheriDepartment of Radiology, Hasheminejad Kidney Center, Iran University of Medical Sciences, Tehran, Iran.
Ali ShabanzadehResearch and Development Department, Med Fanavaran Plus Co., Karaj, Iran.
Mohammad Zare MehrjardiSection of Body Imaging, Division of Clinical Research, Climax Radiology Education Foundation, Tehran, Iran.
Ardavan AkhavanResearch and Development Department, Med Fanavaran Plus Co., Karaj, Iran.
Isaac ShiriDivision of Nuclear Medicine and Molecular Imaging, Geneva University Hospital, 1211, Geneva 4, Switzerland.
Mostafa TaghipourResearch and Development Department, Med Fanavaran Plus Co., Karaj, Iran.
Zahra ShabanzadehResearch and Development Department, Med Fanavaran Plus Co., Karaj, Iran.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Any kidney dimension and volume variation can be a remarkable indicator of kidney disorders. Precise kidney segmentation in standard planes plays an undeniable role in predicting kidney size and volume. On the other hand, ultrasound is the modality of choice in diagnostic procedures. This paper proposes a convolutional neural network with nested layers, namely Fast-Unet++, promoting the Fast and accurate Unet model. First, the model was trained and evaluated for segmenting sagittal and axial images of the kidney. Then, the predicted masks were used to estimate the kidney image biomarkers, including its volume and dimensions (length, width, thickness, and parenchymal thickness). Finally, the proposed model was tested on a publicly available dataset with various shapes and compared with the related networks. Moreover, the network was evaluated using a set of patients who had undergone ultrasound and computed tomography. The dice metric, Jaccard coefficient, and mean absolute distance were used to evaluate the segmentation step. 0.97, 0.94, and 3.23 mm for the sagittal frame, and 0.95, 0.9, and 3.87 mm for the axial frame were achieved. The kidney dimensions and volume were evaluated using accuracy, the area under the curve, sensitivity, specificity, precision, and F1.

Indexed as

Neural Networks, ComputerTomography, X-Ray ComputedHumansImage Processing, Computer-AssistedKidneyUltrasonography

Identifiers

PMID38413748
PMCPMC10899245

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.