Evidence map›Paper›PMID 38415690›Full record

ArticleMicrobiology spectrum2024

Vero cell-adapted SARS-CoV-2 strain shows increased viral growth through furin-mediated efficient spike cleavage.

Shohei Minami, Tomohiro Kotaki, Yusuke Sakai, Shinya Okamura, Shiho Torii, Chikako Ono, Daisuke Motooka, Rina Hamajima, Ryotaro Nouda, Jeffery A Nurdin and 8 more

Abstract read
In one paragraph

Article in Microbiology spectrum, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Recovery of infectious recombinant human norovirus using zebrafish embryos.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Shohei MinamiDepartment of Virology, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.ORCID 0000-0002-3999-348X
Tomohiro KotakiDepartment of Virology, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Yusuke SakaiDepartment of Pathology, National Institute of Infectious Diseases, Tokyo, Japan.
Shinya OkamuraVirus Vaccine Group, BIKEN Innovative Vaccine Research Alliance Laboratories, Institute for Open and Transdisciplinary Research Initiatives, Osaka University, Osaka, Japan.
Shiho ToriiLaboratory of Virus Control, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Chikako OnoLaboratory of Virus Control, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Daisuke MotookaDepartment of Infection Metagenomics, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Rina HamajimaDepartment of Virology, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Ryotaro NoudaDepartment of Virology, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Jeffery A NurdinDepartment of Virology, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Moeko YamasakiDepartment of Virology, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Yuta KanaiDepartment of Virology, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Hirotaka EbinaVirus Vaccine Group, BIKEN Innovative Vaccine Research Alliance Laboratories, Institute for Open and Transdisciplinary Research Initiatives, Osaka University, Osaka, Japan.
Yusuke MaedaLaboratory of Viral Dynamism Research, Research Institute for Microbial Diseases Osaka University, Osaka, Japan.
Toru OkamotoInstitute for Advanced Co-creation Studies, Research Institute for Microbial Diseases Osaka University, Osaka, Japan.
Taro TachibanaCell Engineering Corporation, Osaka, Japan.
Yoshiharu MatsuuraLaboratory of Virus Control, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Takeshi KobayashiDepartment of Virology, Research Institute for Microbial Diseases, Osaka University, Osaka, Japan.ORCID 0000-0002-5532-207X

Funding

Japan Agency for Medical Research and Development (AMED) JP20pc0101047MEXT | JST | Moonshot Research and Development Program (Moonshot) JPMJMS2025
6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) utilizes several host proteases to cleave the spike (S) protein to enter host cells. SARS-CoV-2 S protein is cleaved into S1 and S2 subunits by furin, which is closely involved in the pathogenicity of SARS-CoV-2. However, the effects of the modulated protease cleavage activity due to S protein mutations on viral replication and pathogenesis remain unclear. Herein, we serially passaged two SARS-CoV-2 strains in Vero cells and characterized the cell-adapted SARS-CoV-2 strains IMPORTANCE: The efficacy of the S protein cleavage generally differs among the SARS-CoV-2 variants, resulting in distinct viral characteristics. The relationship between a mutation and the entry of SARS-CoV-2 into host cells remains unclear. In this study, we analyzed the sequence of high-growth Vero cell-adapted SARS-CoV-2 and factors determining the enhancement of the growth of the adapted virus and confirmed the characteristics of the adapted strain by analyzing the recombinant SARS-CoV-2 strain. We successfully identified mutations Δ68-76 and H655Y, which enhance viral growth and the S protein cleavage by furin. Using recombinant viruses enabled us to conduct a virus challenge experiment

Indexed as

COVID-19SARS-CoV-2Spike Glycoprotein, CoronavirusAnimalsChlorocebus aethiopsFurinHumansVero CellsFurinSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2infectionpathogenicitysevere acute respiratory syndrome virus-2 (SARS-CoV-2)spike (S) proteinviral replication

Identifiers

PMID38415690
PMCPMC10986611

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.