Evidence map›Paper›PMID 38418875›Full record

ArticleNature2024

SOX17 enables immune evasion of early colorectal adenomas and cancers.

Norihiro Goto, Peter M K Westcott, Saori Goto, Shinya Imada, Martin S Taylor, George Eng, Jonathan Braverman, Vikram Deshpande, Tyler Jacks, Judith Agudo and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
40.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 96 citations in OpenAlex.

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9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Norihiro GotoDepartment of Biology, The David H. Koch Institute for Integrative Cancer Research at MIT, Massachusetts Institute of Technology, Cambridge, MA, USA.
Peter M K Westcott *Department of Biology, The David H. Koch Institute for Integrative Cancer Research at MIT, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID 0000-0001-9436-4857
Saori Goto *Department of Biology, The David H. Koch Institute for Integrative Cancer Research at MIT, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID 0000-0001-7811-7397
Shinya ImadaDepartment of Biology, The David H. Koch Institute for Integrative Cancer Research at MIT, Massachusetts Institute of Technology, Cambridge, MA, USA.
Martin S TaylorDepartment of Pathology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA.ORCID 0000-0003-1560-9276
George EngDepartment of Biology, The David H. Koch Institute for Integrative Cancer Research at MIT, Massachusetts Institute of Technology, Cambridge, MA, USA.
Jonathan BravermanDepartment of Biology, The David H. Koch Institute for Integrative Cancer Research at MIT, Massachusetts Institute of Technology, Cambridge, MA, USA.
Vikram DeshpandeDepartment of Pathology, Beth Israel Deaconess Hospital and Harvard Medical School, Boston, MA, USA.
Tyler JacksDepartment of Biology, The David H. Koch Institute for Integrative Cancer Research at MIT, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID 0000-0001-5785-8911
Judith AgudoDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, MA, USA. judith_agudo@dfci.harvard.edu.ORCID 0000-0002-3576-3169
Ömer H YilmazDepartment of Biology, The David H. Koch Institute for Integrative Cancer Research at MIT, Massachusetts Institute of Technology, Cambridge, MA, USA. ohyilmaz@gmail.com.ORCID 0000-0002-7577-4612
Harvard University · USMassachusetts Institute of Technology · USBroad Institute · USCold Spring Harbor Laboratory · USInnovative Genomics Institute · US

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI David A Tuveson · 1987 to 2026
$118.9M
VIRUS PRODUCTION COREP30CA014051 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Jacqueline A. Lees · 1985 to 2026
$93.9M
Project 2U54CA224068 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI CORCORAN, RYAN BRUCE, FLAHERTY, KEITH T · 2017 to 2021
$6.3M
Effects of inflammaging on intestinal epithelial cells and aspirin chemoprevention.R01CA257523 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI CHAN, ANDREW T, STAPPENBECK, THADDEUS S · 2021 to 2025
$3.7M
Mechanisms of HIV-associated epithelialintestinal stem cell (ISC) dysfunctionR01DK126545 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI KLOVERPRIS, HENRIK, KWON, DOUGLAS · 2020 to 2024
$3.6M
Immunometabolic regulation of CD8+ T cell mediated intestinal epithelial cell death in people with HIV (PWH)R01DK133919 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI Douglas Kwon, Omer Yilmaz · 2022 to 2026
$3.5M
Developing high-throughput genetic perturbation strategies for single cells in cancer organoidsU01CA250554 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BERGER, BONNIE, YILMAZ, OMER · 2020 to 2022
$2.8M
Impact of fasting on intestinal stem cells and cancerR01CA245314 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Omer Yilmaz · 2020 to 2026
$2.3M
Engineering dendritic cells to target islet antigen to pro-tolerogenic subsets for prevention and treatment of Type 1 DiabetesR01DK132544 · NIDDK · DANA-FARBER CANCER INST · PI Judith Agudo Cantero · 2022 to 2026
$2.2M
Elucidating structural, mechanistic, and allosteric determinants of mTOR Complex 2 (mTORC2) signaling.K08DK129824 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI TAYLOR, MARTIN S · 2021 to 2025
$853k
Mechanisms and strategies to rescue suboptimal T cell priming in colon cancerK22CA279501 · NCI · COLD SPRING HARBOR LABORATORY · PI WESTCOTT, PETER MAXWELL KIENITZ · 2023 to 2025
$603k
Regulation of the Intestinal Stem Cell Niche in AgingK99AG045144 · NIA · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI YILMAZ, OMER · 2013 to 2014
$275k
NCI NIH HHS F32 CA254314NCI NIH HHS K22 CA279501NCI NIH HHS P30 CA014051NCI NIH HHS P30 CA045508NCI NIH HHS R01 CA245314NCI NIH HHS R01 CA257523NCI NIH HHS U01 CA250554NCI NIH HHS U54 CA224068NIA NIH HHS K99 AG045144NIA NIH HHS K99 AG076987NIDDK NIH HHS K08 DK129824NIDDK NIH HHS R01 DK126545NIDDK NIH HHS R01 DK132544NIDDK NIH HHS R01 DK133919
6 · The paper itself

Abstract

A hallmark of cancer is the avoidance of immune destruction. This process has been primarily investigated in locally advanced or metastatic cancer

Indexed as

AdenomaColorectal NeoplasmsImmune EvasionSOXF Transcription FactorsAdenomatous Polyposis Coli ProteinAnimalsCD8-Positive T-LymphocytesChromatinDisease ProgressionEndodermGene Expression ProfilingHMGB ProteinsHumansInterferon-gammaMiceMutationAdenomatous Polyposis Coli Proteinadenomatous polyposis coli protein, mouseChromatinHMGB ProteinsHras protein, mouseInterferon-gammaLGR5 protein, humanProto-Oncogene Proteins p21(ras)Receptors, G-Protein-CoupledSOX17 protein, humanSox17 protein, mouseSOXF Transcription FactorsTrp53 protein, mouseTumor Suppressor Protein p53

Identifiers

PMID38418875
PMCPMC11969226
OpenAlexW4392242592

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.