Evidence map›Paper›PMID 38425875›Full record

ArticleData in brief2024

Dataset for selection of stable reference genes for accurate quantitative gene expression analysis in silvertip tetra (

Hwa Jin Lee, Ki Tae Kim, Min Sun Kim, Sang Yoon Lee

Open access · goldAbstract read
In one paragraph

Article in Data in brief, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Hwa Jin LeeCellQua, Inc, Seongnam 13595, South Korea.
Ki Tae KimSoutheast Sea Fisheries Research Institute, NFRDI, 398-68, Sanyangilju-ro, Sangyang-Up Tongyeong, Gyoengnam 650-943, Korea.
Min Sun KimDepartment of Biological Sciences, Kongju National University, Gongju 32588, South Korea.
Sang Yoon LeeCellQua, Inc, Seongnam 13595, South Korea.
Kongju National University · KRNational Institute of Fisheries Science · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Real-time quantitative PCR (RT-qPCR) is a widely used method for accurate quantitative gene expression analysis. For accurate quantitative verification of RT-qPCR, it is essential to select a reference gene with high expression stability depending on the experimental environment or the different tissues. In this study, we evaluated the stability of nine candidate reference genes, labeled elongation factor 1-alpha (EF1A), ERBB receptor feedback inhibitor 1-like isoform x2 (ERRFI), glyceraldehyde-3-phosphate dehydrogenase (GAPDH), integrin beta2 like (ITGB2), phosphatidylinositol-binding clathrin assembly protein-like isoform x3 (PICALM), 60 s ribosomal protein L5 (RPL5), 60 s ribosomal protein L7 (RPL7), tubulin beta chain (TUBB), and ubiquitin-conjugating enzyme E2A (UBE2A), in the brain (including pituitary gland) gonads and caudal fins of silvertip tetra (

Indexed as

Gene expressionReference genesRT-qPCRSilvertip tetra

Identifiers

PMID38425875
PMCPMC10904181
OpenAlexW4391981253

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.